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Package 129/516HostnameOS / ArchBUILDCHECKBUILD BIN
DECIPHER 1.0.0
Erik Wright
Snapshot Date: 2012-01-08 18:22:44 -0800 (Sun, 08 Jan 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/DECIPHER
Last Changed Rev: 59920 / Revision: 61898
Last Changed Date: 2011-10-31 15:59:03 -0700 (Mon, 31 Oct 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  ERROR  OK 
gewurz Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 [ ERROR ] skipped  skipped 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: DECIPHER
Version: 1.0.0
Command: chmod a+r DECIPHER -R && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data DECIPHER
StartedAt: 2012-01-09 00:33:43 -0800 (Mon, 09 Jan 2012)
EndedAt: 2012-01-09 00:34:12 -0800 (Mon, 09 Jan 2012)
EllapsedTime: 28.5 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'DECIPHER/DESCRIPTION' ... OK
* preparing 'DECIPHER':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: Biostrings
Loading required package: IRanges

Attaching package: 'IRanges'

The following object(s) are masked from 'package:base':

    Map, cbind, eval, intersect, mapply, order, paste, pmax, pmax.int,
    pmin, pmin.int, rbind, rep.int, setdiff, table, union

Loading required package: RSQLite
Loading required package: DBI

Error: processing vignette 'DECIPHERing.Rnw' failed with diagnostics:
 chunk 3 (label = expr2) 
Error in shell.exec(url) : 
  problem in displaying 'D:\biocbld\bbs-2.9-bioc\tmpdir\RtmpOOaQKO/db.html'
Execution halted