Starr 1.9.2
Benedikt Zacher
| Snapshot Date: 2011-07-06 19:21:50 -0700 (Wed, 06 Jul 2011) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/Starr | | Last Changed Rev: 55754 / Revision: 56603 | | Last Changed Date: 2011-05-20 00:39:48 -0700 (Fri, 20 May 2011) |
| wilson2 | Linux (openSUSE 11.4) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | ERROR | skipped | skipped |
| gewurz | Windows Server 2008 R2 Enterprise (64-bit) / x64 | [ ERROR ] | skipped | skipped |
| moscato1 | Windows Server 2008 R2 Enterprise (64-bit) / x64 | ERROR | skipped | skipped |
| pitt | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* checking for file 'Starr/DESCRIPTION' ... OK
* preparing 'Starr':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
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* installing *source* package 'Starr' ...
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WARNING: this package has a configure script
It probably needs manual configuration
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** libs
x86_64-w64-mingw32-gcc -I"D:/biocbld/BBS-2˜1.9-B/R/include" -DHAVE_ZLIB -O2 -Wall -std=gnu99 -c ahocorasick.c -o ahocorasick.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/BBS-2˜1.9-B/R/include" -DHAVE_ZLIB -O2 -Wall -std=gnu99 -c collect.c -o collect.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/BBS-2˜1.9-B/R/include" -DHAVE_ZLIB -O2 -Wall -std=gnu99 -c rm_small_peak.c -o rm_small_peak.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/BBS-2˜1.9-B/R/include" -DHAVE_ZLIB -O2 -Wall -std=gnu99 -c sort_by_genomic.c -o sort_by_genomic.o
x86_64-w64-mingw32-gcc -shared -s -static-libgcc -o Starr.dll tmp.def ahocorasick.o collect.o rm_small_peak.o sort_by_genomic.o -lRzlib -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lR
ahocorasick.o:ahocorasick.c:(.text+0x106): undefined reference to `gzread'
ahocorasick.o:ahocorasick.c:(.text+0xcb4): undefined reference to `gzopen'
ahocorasick.o:ahocorasick.c:(.text+0x10ae): undefined reference to `gzclose'
ahocorasick.o:ahocorasick.c:(.text+0x143b): undefined reference to `gzread'
ahocorasick.o:ahocorasick.c:(.text+0x1481): undefined reference to `gzread'
ahocorasick.o:ahocorasick.c:(.text+0x1505): undefined reference to `gzread'
ahocorasick.o:ahocorasick.c:(.text+0x1553): undefined reference to `gzread'
collect2: ld returned 1 exit status
ERROR: compilation failed for package 'Starr'
* removing 'D:/biocbld/bbs-2.9-bioc/tmpdir/Rtmpm4A4xq/Rinst54926b76/Starr'
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ERROR: package installation failed