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Package 93/106HostnameOS / ArchBUILDCHECKBUILD BIN
simpIntLists 0.99.0
Kircicegi Korkmaz
Snapshot Date: 2011-10-18 23:15:16 -0700 (Tue, 18 Oct 2011)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/simpIntLists
Last Changed Rev: 1466 / Revision: 1763
Last Changed Date: 2011-03-24 13:25:09 -0700 (Thu, 24 Mar 2011)
lamb1 Linux (openSUSE 11.3) / x86_64  OK [ OK ]
gewurz Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  WARNINGS  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: simpIntLists
Version: 0.99.0
Command: /home/biocbuild/bbs-2.8-bioc/R/bin/R CMD check --no-vignettes --timings simpIntLists_0.99.0.tar.gz
StartedAt: 2011-10-19 01:17:28 -0700 (Wed, 19 Oct 2011)
EndedAt: 2011-10-19 01:18:04 -0700 (Wed, 19 Oct 2011)
EllapsedTime: 35.5 seconds
RetCode: 0
Status:  OK 
CheckDir: simpIntLists.Rcheck
Warnings: 0

Command output

* using log directory ‘/loc/home/biocbuild/bbs-2.8-data-experiment/meat/simpIntLists.Rcheck’
* using R version 2.13.2 (2011-09-30)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘simpIntLists/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘simpIntLists’ version ‘0.99.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package ‘simpIntLists’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

simpIntLists.Rcheck/00install.out:

* installing *source* package ‘simpIntLists’ ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (simpIntLists)

simpIntLists.Rcheck/simpIntLists-Ex.timings:

nameusersystemelapsed
ArabidopsisBioGRIDInteractionEntrezId0.0480.0400.089
ArabidopsisBioGRIDInteractionOfficial0.0400.0600.102
ArabidopsisBioGRIDInteractionUniqueId0.0560.0600.114
C.ElegansBioGRIDInteractionEntrezId0.0520.0800.130
C.ElegansBioGRIDInteractionOfficial0.0880.0920.179
C.ElegansBioGRIDInteractionUniqueId0.0880.1000.188
FruitFlyBioGRIDInteractionEntrezId0.1240.2360.359
FruitFlyBioGRIDInteractionOfficial0.2960.2400.538
FruitFlyBioGRIDInteractionUniqueId0.4240.1840.608
HumanBioGRIDInteractionEntrezId0.1440.3040.450
HumanBioGRIDInteractionOfficial0.3880.3320.721
HumanBioGRIDInteractionUniqueId0.0440.0440.089
MouseBioGRIDInteractionEntrezId0.0560.0480.101
MouseBioGRIDInteractionOfficial0.0640.0520.117
MouseBioGRIDInteractionUniqueId0.0120.0000.016
S.PombeBioGRIDInteractionEntrezId0.0800.0760.156
S.PombeBioGRIDInteractionOfficial0.1080.1120.216
S.PombeBioGRIDInteractionUniqueId0.1640.1080.275
YeastBioGRIDInteractionEntrezId0.3000.6280.925
YeastBioGRIDInteractionOfficial0.9640.6601.626
YeastBioGRIDInteractionUniqueId1.1840.8762.358
findInteractionList0.0360.0440.079
simpIntLists0.2560.0360.289