crlmm 1.10.0
Benilton S Carvalho , Robert Scharpf , Matt Ritchie
| Snapshot Date: 2011-10-20 07:20:33 -0700 (Thu, 20 Oct 2011) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_8/madman/Rpacks/crlmm | | Last Changed Rev: 54808 / Revision: 59457 | | Last Changed Date: 2011-04-13 18:03:42 -0700 (Wed, 13 Apr 2011) |
| lamb1 | Linux (openSUSE 11.3) / x86_64 | OK | WARNINGS | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | WARNINGS | OK |
| gewurz | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | WARNINGS | [ OK ] |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | WARNINGS | OK |
* installing *source* package 'crlmm' ...
** libs
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.8-bioc/R/include" -O2 -Wall -std=gnu99 -c gtypeCaller.c -o gtypeCaller.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.8-bioc/R/include" -O2 -Wall -std=gnu99 -c init.c -o init.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.8-bioc/R/include" -O2 -Wall -std=gnu99 -c trimmed.c -o trimmed.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.8-bioc/R/include" -O2 -Wall -std=gnu99 -c utils.c -o utils.o
utils.c: In function 'mad_median':
utils.c:124:15: warning: unused variable 'n_ignore'
x86_64-w64-mingw32-gcc -shared -s -static-libgcc -o crlmm.dll tmp.def gtypeCaller.o init.o trimmed.o utils.o -LD:/biocbld/bbs-2.8-bioc/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.8-bioc/meat/crlmm.buildbin-libdir/crlmm/libs/x64
** R
** data
** inst
** preparing package for lazy loading
================================================================================
Welcome to oligoClasses version 1.14.0
================================================================================
Large dataset support for 'oligo/crlmm': Disabled
- Load 'ff'
================================================================================
Parallel computing support for 'oligo/crlmm': Disabled
- Load 'ff'
- Load 'snow'
- Use options(cluster=makeCluster(...))
================================================================================
Loading package bit1.1-7
package:bit (c) 2008/2009 Jens Oehlschlaegel (GPL-2)
creators: bit bitwhich
coercion: as.logical as.integer as.bit as.bitwhich which
operator: ! & | xor != ==
querying: print length any all min max range sum summary
bit access: length<- [ [<- [[ [[<-
for more help type ?bit
Loading package ff2.2-3
- getOption("fftempdir")=="D:/biocbld/bbs-2.8-bioc/tmpdir/Rtmp4rgdYc"
- getOption("ffextension")=="ff"
- getOption("ffdrop")==TRUE
- getOption("fffinonexit")==TRUE
- getOption("ffpagesize")==65536
- getOption("ffcaching")=="mmnoflush" -- consider "ffeachflush" if your system stalls on large writes
- getOption("ffbatchbytes")==42928701.44 -- consider a different value for tuning your system
- getOption("ffmaxbytes")==2146435072 -- consider a different value for tuning your system
Creating a new generic function for "lines" in "crlmm"
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
================================================================================
Welcome to oligoClasses version 1.14.0
================================================================================
Large dataset support for 'oligo/crlmm': Disabled
- Load 'ff'
================================================================================
Parallel computing support for 'oligo/crlmm': Disabled
- Load 'ff'
- Load 'snow'
- Use options(cluster=makeCluster(...))
================================================================================
Welcome to crlmm version 1.10.0
* MD5 sums
packaged installation of 'crlmm' as crlmm_1.10.0.zip
* DONE (crlmm)