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Package 107/444HostnameOS / ArchBUILDCHECKBUILD BIN
DAVIDQuery 1.11.0
Roger Day
Snapshot Date: 2011-03-17 11:16:30 -0700 (Thu, 17 Mar 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/DAVIDQuery
Last Changed Rev: 51543 / Revision: 53825
Last Changed Date: 2010-12-15 14:23:27 -0800 (Wed, 15 Dec 2010)
lamb1 Linux (openSUSE 11.3) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
petty Mac OS X Snow Leopard (10.6.6) / i386  OK [ OK ] OK 

Summary

Package: DAVIDQuery
Version: 1.11.0
Command: /Library/Frameworks/R.framework/Versions/2.13/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch DAVIDQuery_1.11.0.tar.gz
StartedAt: 2011-03-17 16:06:51 -0700 (Thu, 17 Mar 2011)
EndedAt: 2011-03-17 16:07:19 -0700 (Thu, 17 Mar 2011)
EllapsedTime: 28.9 seconds
RetCode: 0
Status:  OK 
CheckDir: DAVIDQuery.Rcheck
Warnings: 0

Command output

* using log directory '/Users/biocbuild/bbs-2.8-bioc/meat/DAVIDQuery.Rcheck'
* using R version 2.13.0 Under development (unstable) (2011-03-06 r54683)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'DAVIDQuery/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'DAVIDQuery' version '1.11.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'DAVIDQuery' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

DAVIDQuery.Rcheck/00install.out:

* installing *source* package 'DAVIDQuery' ...
** R
** inst
** preparing package for lazy loading
Loading required package: bitops
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
This is DAVIDQuery Version  1.11.0   2010-06-10 

* DONE (DAVIDQuery)

DAVIDQuery.Rcheck/DAVIDQuery-Ex.timings:

nameusersystemelapsed
DAVIDQuery0.0360.0041.572
bracketedStrings0.0010.0000.002
convertIDList000
findInBrackets0.0000.0000.001
getAffyChipTypes0.0010.0000.000
getAffyProbesetList0.2110.0273.317
getAnnotationChoices0.0000.0000.001
getIdConversionChoices0.0000.0010.000
requestIDConversion0.0010.0000.000
testGene2Gene0.0420.0041.629
uploadIDList0.0010.0000.000