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Package 65/444HostnameOS / ArchBUILDCHECKBUILD BIN
BUS 1.7.0
Yuanhua Liu
Snapshot Date: 2011-03-17 11:16:30 -0700 (Thu, 17 Mar 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/BUS
Last Changed Rev: 50725 / Revision: 53825
Last Changed Date: 2010-11-06 14:29:12 -0700 (Sat, 06 Nov 2010)
lamb1 Linux (openSUSE 11.3) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
petty Mac OS X Snow Leopard (10.6.6) / i386  OK  OK [ OK ]

Summary

Package: BUS
Version: 1.7.0
Command: /Users/biocbuild/BBS/utils/build-universal.sh BUS_1.7.0.tar.gz /Library/Frameworks/R.framework/Versions/2.13/Resources/bin/R BUS.buildbin-libdir
StartedAt: 2011-03-17 17:55:06 -0700 (Thu, 17 Mar 2011)
EndedAt: 2011-03-17 17:55:11 -0700 (Thu, 17 Mar 2011)
EllapsedTime: 5.3 seconds
RetCode: 0
Status:  OK 
PackageFile: BUS_1.7.0.tgz
PackageFileSize: 2.805 MiB

Command output

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --library=BUS.buildbin-libdir BUS_1.7.0.tar.gz'
>>>>>>> 

* installing *source* package 'BUS' ...
** libs
*** arch - i386
g++ -arch i386 -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -fasm-blocks -c BUS.cpp -o BUS.o
g++ -arch i386 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o BUS.so BUS.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.8-bioc/meat/BUS.buildbin-libdir/BUS/libs/i386
*** arch - ppc
g++ -arch ppc -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -Wall -fasm-blocks -c BUS.cpp -o BUS.o
g++ -arch ppc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o BUS.so BUS.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.8-bioc/meat/BUS.buildbin-libdir/BUS/libs/ppc
*** arch - x86_64
g++ -arch x86_64 -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include/x86_64  -I/usr/local/include    -fPIC  -g -O2 -Wall -fasm-blocks -c BUS.cpp -o BUS.o
g++ -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o BUS.so BUS.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.8-bioc/meat/BUS.buildbin-libdir/BUS/libs/x86_64
** R
** data
** inst
** preparing package for lazy loading
Loading required package: infotheo
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (BUS)


>>>>>>> 
>>>>>>> FIXING LINKS FOR BUS.buildbin-libdir/BUS/libs/i386/BUS.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgcc_s.1.dylib" "BUS.buildbin-libdir/BUS/libs/i386/BUS.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgfortran.2.dylib" "BUS.buildbin-libdir/BUS/libs/i386/BUS.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.5.2.dylib" "BUS.buildbin-libdir/BUS/libs/i386/BUS.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.dylib" "BUS.buildbin-libdir/BUS/libs/i386/BUS.so"


>>>>>>> 
>>>>>>> FIXING LINKS FOR BUS.buildbin-libdir/BUS/libs/ppc/BUS.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgcc_s.1.dylib" "BUS.buildbin-libdir/BUS/libs/ppc/BUS.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgfortran.2.dylib" "BUS.buildbin-libdir/BUS/libs/ppc/BUS.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.5.2.dylib" "BUS.buildbin-libdir/BUS/libs/ppc/BUS.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.dylib" "BUS.buildbin-libdir/BUS/libs/ppc/BUS.so"


>>>>>>> 
>>>>>>> FIXING LINKS FOR BUS.buildbin-libdir/BUS/libs/x86_64/BUS.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgcc_s.1.dylib" "BUS.buildbin-libdir/BUS/libs/x86_64/BUS.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgfortran.2.dylib" "BUS.buildbin-libdir/BUS/libs/x86_64/BUS.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.5.2.dylib" "BUS.buildbin-libdir/BUS/libs/x86_64/BUS.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.dylib" "BUS.buildbin-libdir/BUS/libs/x86_64/BUS.so"