oligo 1.15.4
Benilton Carvalho
| Snapshot Date: 2011-02-24 11:26:35 -0800 (Thu, 24 Feb 2011) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/oligo | | Last Changed Rev: 53105 / Revision: 53255 | | Last Changed Date: 2011-02-23 08:07:55 -0800 (Wed, 23 Feb 2011) |
| lamb2 | Linux (openSUSE 11.2) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | [ OK ] |
| gewurz | Windows Server 2008 R2 Enterprise (64-bit) / x64 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
| petty | Mac OS X Snow Leopard (10.6.4) / i386 | OK | OK | OK |
* installing *source* package 'oligo' ...
** libs
gcc -I"E:/biocbld/bbs-2.8-bioc/R/include" -I"E:/biocbld/bbs-2.8-bioc/R/library/preprocessCore/include" -O3 -Wall -std=gnu99 -c ParserGzXYS.c -o ParserGzXYS.o
ParserGzXYS.c: In function 'gzread_one_xys':
ParserGzXYS.c:74:54: warning: unused variable 'token'
gcc -I"E:/biocbld/bbs-2.8-bioc/R/include" -I"E:/biocbld/bbs-2.8-bioc/R/library/preprocessCore/include" -O3 -Wall -std=gnu99 -c ParserXYS.c -o ParserXYS.o
gcc -I"E:/biocbld/bbs-2.8-bioc/R/include" -I"E:/biocbld/bbs-2.8-bioc/R/library/preprocessCore/include" -O3 -Wall -std=gnu99 -c baseProfile.c -o baseProfile.o
gcc -I"E:/biocbld/bbs-2.8-bioc/R/include" -I"E:/biocbld/bbs-2.8-bioc/R/library/preprocessCore/include" -O3 -Wall -std=gnu99 -c basecontent.c -o basecontent.o
gcc -I"E:/biocbld/bbs-2.8-bioc/R/include" -I"E:/biocbld/bbs-2.8-bioc/R/library/preprocessCore/include" -O3 -Wall -std=gnu99 -c chipbackground.c -o chipbackground.o
gcc -I"E:/biocbld/bbs-2.8-bioc/R/include" -I"E:/biocbld/bbs-2.8-bioc/R/library/preprocessCore/include" -O3 -Wall -std=gnu99 -c rma2.c -o rma2.o
gcc -I"E:/biocbld/bbs-2.8-bioc/R/include" -I"E:/biocbld/bbs-2.8-bioc/R/library/preprocessCore/include" -O3 -Wall -std=gnu99 -c rma_common.c -o rma_common.o
gcc -I"E:/biocbld/bbs-2.8-bioc/R/include" -I"E:/biocbld/bbs-2.8-bioc/R/library/preprocessCore/include" -O3 -Wall -std=gnu99 -c trimmed.c -o trimmed.o
gcc -shared -s -static-libgcc -o oligo.dll tmp.def ParserGzXYS.o ParserXYS.o baseProfile.o basecontent.o chipbackground.o rma2.o rma_common.o trimmed.o -lRzlib -LE:/biocbld/bbs-2.8-bioc/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.8-bioc/meat/oligo.buildbin-libdir/oligo/libs/i386
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'browseVignettes()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
================================================================================
Welcome to oligoClasses version 1.13.9
================================================================================
Large dataset support for 'oligo/crlmm': Disabled
- Load 'ff'
================================================================================
Parallel computing support for 'oligo/crlmm': Disabled
- Load 'ff'
- Load 'snow'
- Use options(cluster=makeCluster(...))
================================================================================
Creating a new generic function for "boxplot" in "oligo"
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
================================================================================
Welcome to oligo version 1.15.4
================================================================================
* MD5 sums
packaged installation of 'oligo' as oligo_1.15.4.zip
* DONE (oligo)