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yeastGSData 0.1.5
R. Gentleman
Snapshot Date: 2011-02-27 12:29:13 -0800 (Sun, 27 Feb 2011)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/yeastGSData
Last Changed Rev: 959 / Revision: 1436
Last Changed Date: 2009-09-10 11:19:18 -0700 (Thu, 10 Sep 2009)
lamb2 Linux (openSUSE 11.2) / x86_64  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK [ OK ] OK 

Summary

Package: yeastGSData
Version: 0.1.5
Command: /Library/Frameworks/R.framework/Versions/2.12/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch yeastGSData_0.1.5.tar.gz
StartedAt: 2011-02-27 15:11:39 -0800 (Sun, 27 Feb 2011)
EndedAt: 2011-02-27 15:14:17 -0800 (Sun, 27 Feb 2011)
EllapsedTime: 157.8 seconds
RetCode: 0
Status:  OK 
CheckDir: yeastGSData.Rcheck
Warnings: 0

Command output

* using log directory ‘/Users/biocbuild/bbs-2.7-data-experiment/meat/yeastGSData.Rcheck’
* using R version 2.12.2 Patched (2011-02-25 r54591)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘yeastGSData/DESCRIPTION’ ... OK
* this is package ‘yeastGSData’ version ‘0.1.5’
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package ‘yeastGSData’ can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking Rd files ... NOTE
prepare_Rd: BayesFactorNGS.Rd:24-25: Dropping empty section \source
prepare_Rd: BayesFactorNGS.Rd:26-27: Dropping empty section \references
prepare_Rd: BayesFactorPGS.Rd:24-25: Dropping empty section \source
prepare_Rd: BayesFactorPGS.Rd:26-27: Dropping empty section \references
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

yeastGSData.Rcheck/00install.out:

* installing *source* package ‘yeastGSData’ ...
** data
** inst
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (yeastGSData)

yeastGSData.Rcheck/yeastGSData-Ex.timings:

nameusersystemelapsed
BayesFactorNGS0.0370.0040.040
BayesFactorPGS0.0230.0010.024
BinaryGS0.0050.0010.005
MIPSGS0.0300.0010.031
Mpact0.1010.0020.103
MpactEvidenceCodes0.0030.0000.003
NEGGS9.0270.6879.717
POSPS0.0060.0010.006
PRS0.0020.0000.003