Package: gageData

Version: 1.1.0

Command: /Library/Frameworks/R.framework/Versions/2.12/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch gageData_1.1.0.tar.gz

StartedAt: 2011-04-06 14:11:01 -0700 (Wed, 06 Apr 2011)

EndedAt: 2011-04-06 14:12:09 -0700 (Wed, 06 Apr 2011)

EllapsedTime: 68.1 seconds

RetCode: 0

Status:  OK

CheckDir: gageData.Rcheck

Warnings: 0

* using log directory '/Users/biocbuild/bbs-2.7-data-experiment/meat/gageData.Rcheck'
* using R version 2.12.1 Patched (2011-01-04 r53913)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'gageData/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'gageData' version '1.1.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'gageData' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... NOTE
'library' or 'require' call not declared from: genefilter
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

* installing *source* package 'gageData' ...
** data
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (gageData)

name	user	system	elapsed
bmp6	1.511	0.042	2.208
genesets	0.541	0.036	0.995
gse16873.full	1.945	0.110	2.055
sc.gene	0.033	0.002	0.035