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Package 22/84HostnameOS / ArchBUILDCHECKBUILD BIN
estrogen 1.8.5
R. Gentleman
Snapshot Date: 2010-11-11 12:27:34 -0800 (Thu, 11 Nov 2010)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/estrogen
Last Changed Rev: 1036 / Revision: 1384
Last Changed Date: 2009-10-12 11:55:42 -0700 (Mon, 12 Oct 2009)
lamb2 Linux (openSUSE 11.2) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: estrogen
Version: 1.8.5
Command: E:\biocbld\bbs-2.7-bioc\R\bin\R.exe CMD check --no-vignettes --timings estrogen_1.8.5.tar.gz
StartedAt: 2010-11-11 15:44:47 -0800 (Thu, 11 Nov 2010)
EndedAt: 2010-11-11 15:45:34 -0800 (Thu, 11 Nov 2010)
EllapsedTime: 47.5 seconds
RetCode: 0
Status:  OK  
CheckDir: estrogen.Rcheck
Warnings: 0

Command output

* using log directory 'E:/biocbld/bbs-2.7-data-experiment/meat/estrogen.Rcheck'
* using R version 2.12.0 RC (2010-10-11 r53293)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'estrogen/DESCRIPTION' ... OK
* this is package 'estrogen' version '1.8.5'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'estrogen' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... NONE
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

estrogen.Rcheck/00install.out:

* installing *source* package 'estrogen' ...
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: hgu95av2

******* Deprecation warning *******:

The package 'hgu95av2' is deprecated and will not be supported in the future. 

Instead we strongly reccomend that you should start using the 'hgu95av2.db' package. 

We hope you will enjoy these new packages.  If you still have questions, you can search 
(http://dir.gmane.org/gmane.science.biology.informatics.conductor) or ask the mailing list 
(http://bioconductor.org/docs/mailList.html).  


Loading required package: hgu95av2cdf
Loading required package: vsn
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (estrogen)