Package: hypergraph

Version: 1.22.0

Command: /Library/Frameworks/R.framework/Versions/2.12/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch hypergraph_1.22.0.tar.gz

StartedAt: 2011-03-31 06:20:26 -0700 (Thu, 31 Mar 2011)

EndedAt: 2011-03-31 06:20:55 -0700 (Thu, 31 Mar 2011)

EllapsedTime: 29.3 seconds

RetCode: 0

Status:  OK

CheckDir: hypergraph.Rcheck

Warnings: 0

* using log directory ‘/Users/biocbuild/bbs-2.7-bioc/meat/hypergraph.Rcheck’
* using R version 2.12.2 Patched (2011-02-25 r54591)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘hypergraph/DESCRIPTION’ ... OK
* this is package ‘hypergraph’ version ‘1.22.0’
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package ‘hypergraph’ can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
prepare_Rd: kCores.Rd:29: Dropping empty section \seealso
prepare_Rd: vCover.Rd:32: Dropping empty section \seealso
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

* installing *source* package ‘hypergraph’ ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (hypergraph)

name	user	system	elapsed
DirectedHyperedge-class	0.000	0.000	0.001
Hyperedge-class	0.001	0.001	0.001
Hypergraph-class	0.003	0.000	0.002
kCores	0.069	0.003	0.075
l2hel	0.001	0.000	0.002
vCover	0.019	0.000	0.020