Package: coRNAi

Version: 1.0.0

Command: D:\biocbld\bbs-2.7-bioc\R\bin\R.exe CMD check --no-vignettes --timings coRNAi_1.0.0.tar.gz

StartedAt: 2011-04-07 09:43:59 -0700 (Thu, 07 Apr 2011)

EndedAt: 2011-04-07 09:46:46 -0700 (Thu, 07 Apr 2011)

EllapsedTime: 167.2 seconds

RetCode: 0

Status:  OK

CheckDir: coRNAi.Rcheck

Warnings: 0

* using log directory 'D:/biocbld/bbs-2.7-bioc/meat/coRNAi.Rcheck'
* using R version 2.12.2 (2011-02-25)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'coRNAi/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'coRNAi' version '1.0.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'coRNAi' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

* installing *source* package 'coRNAi' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: RColorBrewer
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: genefilter
Loading required package: splots
Loading required package: vsn
Loading required package: hwriter
Loading required package: locfit
Loading required package: akima
Loading required package: lattice
locfit 1.5-6 	 2010-01-20 
Loading required package: grid
Scalable Robust Estimators with High Breakdown Point (version 1.2-01)
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (coRNAi)

name	user	system	elapsed
BoxPlotShorth	0.61	0.00	0.61
InteractGraph	0	0	0
InteractLevelPlot	0.37	0.01	0.39
MainFitPlot	0.02	0.00	0.02
PlotHeatmap	0.45	0.00	0.45
Pplot	0	0	0
cellHTS2df	0.20	0.00	0.21
cortestmatrices	7.99	0.00	7.98
data2graph	0	0	0
df2array	0.29	0.02	0.31
df2fitmatrix	0.57	0.00	0.56
df2lmFit	0.56	0.03	0.60
estmodel	0.47	0.00	0.47
faultyscreen	0.06	0.00	0.06
interactiontable	0.02	0.00	0.02
key	0	0	0
repplots	7.56	0.33	8.03
rlmmain	0.44	0.03	0.47
screen1_raw	0	0	0
screen2_raw	0.09	0.00	0.09
signalplots	0.5	0.0	0.5
tt2matrix	0	0	0
updateDf	0.22	0.00	0.22
weightDf	0.20	0.00	0.21