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Package 246/389HostnameOS / ArchBUILDCHECKBUILD BIN
minet 2.4.0
Patrick E. Meyer
Snapshot Date: 2010-10-04 11:22:20 -0700 (Mon, 04 Oct 2010)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_6/madman/Rpacks/minet
Last Changed Rev: 46401 / Revision: 49923
Last Changed Date: 2010-04-22 11:21:23 -0700 (Thu, 22 Apr 2010)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: minet
Version: 2.4.0
Command: E:\biocbld\bbs-2.6-bioc\R\bin\R.exe CMD check --no-vignettes --timings minet_2.4.0.tar.gz
StartedAt: 2010-10-04 19:10:59 -0700 (Mon, 04 Oct 2010)
EndedAt: 2010-10-04 19:11:34 -0700 (Mon, 04 Oct 2010)
EllapsedTime: 35.1 seconds
RetCode: 0
Status:  OK  
CheckDir: minet.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.6-bioc/meat/minet.Rcheck'
* using R version 2.11.1 (2010-05-31)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'minet/DESCRIPTION' ... OK
* this is package 'minet' version '2.4.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'minet' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking data for non-ASCII characters ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $BLAS_LIBS ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

minet.Rcheck/00install.out:

* install options are ' --no-html'

* installing *source* package 'minet' ...
** libs
  making DLL ...
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include"         -O2 -Wall  -c aracne.cpp -o aracne.o
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include"         -O2 -Wall  -c clr.cpp -o clr.o
clr.cpp:52:2: warning: no newline at end of file
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include"         -O2 -Wall  -c minet.cpp -o minet.o
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include"         -O2 -Wall  -c mrnet.cpp -o mrnet.o
mrnet.cpp: In function 'SEXPREC* mrnet(SEXPREC*, SEXPREC*)':
mrnet.cpp:66: warning: comparison between signed and unsigned integer expressions
mrnet.cpp:12: warning: unused variable 'tmp'
mrnet.cpp: In function 'SEXPREC* mrnetb(SEXPREC*, SEXPREC*)':
mrnet.cpp:6: warning: control reaches end of non-void function
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include"         -O2 -Wall  -c symetrize.cpp -o symetrize.o
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include"         -O2 -Wall  -c validate.cpp -o validate.o
g++ -shared -s -static-libgcc -o minet.dll tmp.def aracne.o clr.o minet.o mrnet.o symetrize.o validate.o -LE:/biocbld/bbs-2.6-bioc/R/bin -lR
installing to E:/biocbld/bbs-2.6-bioc/meat/minet.Rcheck/minet/libs
  ... done
** R
** data
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (minet)

minet.Rcheck/minet-Ex.timings:

nameusersystemelapsed
aracne0.010.010.03
build.mim0.020.000.01
clr0.010.000.01
minet0.040.000.04
mrnet0.010.000.01
mrnetb0.000.020.02
syn.data0.020.000.02
syn.net0.010.020.03
validate0.020.010.03
vis.res0.110.020.13