Package: genoCN

Version: 1.0.0

Command: chmod a+r genoCN -R && D:\biocbld\bbs-2.6-bioc\R\bin\R.exe CMD build genoCN

StartedAt: 2010-10-04 15:10:24 -0700 (Mon, 04 Oct 2010)

EndedAt: 2010-10-04 15:10:42 -0700 (Mon, 04 Oct 2010)

EllapsedTime: 18.2 seconds

RetCode: 0

Status:  OK

PackageFile: genoCN_1.0.0.tar.gz

PackageFileSize: 1.519 MiB

* checking for file 'genoCN/DESCRIPTION' ... OK
* preparing 'genoCN':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* installing *source* package 'genoCN' ...
** libs
  making DLL ...
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include"         -O2 -Wall  -std=gnu99 -c tnorm_mle.c -o tnorm_mle.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include"         -O2 -Wall  -std=gnu99 -c utility.c -o utility.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include"         -O2 -Wall  -std=gnu99 -c xCNV.c -o xCNV.o
xCNV.c: In function 'emiss':
xCNV.c:317: warning: unused variable 'k'
xCNV.c:317: warning: unused variable 'K'
xCNV.c: In function 'baum_welch':
xCNV.c:787: warning: unused variable 'sd_b_tmp'
xCNV.c:787: warning: unused variable 'mu_b_tmp'
xCNV.c:768: warning: 'nGtp' may be used uninitialized in this function
xCNV.c:769: warning: 'pbf' may be used uninitialized in this function
x86_64-w64-mingw32-gcc -shared -s -static-libgcc -o genoCN.dll tmp.def tnorm_mle.o utility.o xCNV.o -LD:/biocbld/bbs-2.6-bioc/R/bin -lR
installing to D:/biocbld/bbs-2.6-bioc/tmpdir/Rinst324019052/genoCN/libs/x64
  ... done
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (genoCN)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'genoCN_1.0.0.tar.gz'