Back to the "Multiple platform build/check report" A  B  C  D  E [F] G  H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

Package 127/389HostnameOS / ArchBUILDCHECKBUILD BIN
flowMerge 1.2.1
Greg Finak
Snapshot Date: 2010-10-04 11:22:20 -0700 (Mon, 04 Oct 2010)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_6/madman/Rpacks/flowMerge
Last Changed Rev: 47382 / Revision: 49923
Last Changed Date: 2010-06-09 13:27:07 -0700 (Wed, 09 Jun 2010)
wilson1 Linux (openSUSE 11.1) / x86_64  OK [ OK ]
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: flowMerge
Version: 1.2.1
Command: /home/biocbuild/bbs-2.6-bioc/R/bin/R CMD check --no-vignettes --timings flowMerge_1.2.1.tar.gz
StartedAt: 2010-10-04 17:22:09 -0700 (Mon, 04 Oct 2010)
EndedAt: 2010-10-04 17:23:38 -0700 (Mon, 04 Oct 2010)
EllapsedTime: 89.1 seconds
RetCode: 0
Status:  OK 
CheckDir: flowMerge.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.6-bioc/meat/flowMerge.Rcheck'
* using R version 2.11.1 (2010-05-31)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'flowMerge/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'flowMerge' version '1.2.1'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'flowMerge' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

flowMerge.Rcheck/00install.out:

* install options are ' --no-html'

* installing *source* package 'flowMerge' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: mnormt
Loading required package: ellipse
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: flowCore
Loading required package: rrcov
Loading required package: robustbase
Loading required package: pcaPP
Loading required package: mvtnorm
Scalable Robust Estimators with High Breakdown Point (version 1.1-00)

Attaching package: 'flowCore'

The following object(s) are masked from 'package:stats':

    alias, filter


Attaching package: 'flowClust'

The following object(s) are masked from 'package:mvtnorm':

    dmvt

The following object(s) are masked from 'package:graphics':

    box

Creating a new generic function for "merge" in "flowMerge"
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (flowMerge)

flowMerge.Rcheck/flowMerge-Ex.timings:

nameusersystemelapsed
NENT0.9160.0000.955
fitPiecewiseLinreg0.8200.0080.828
flowClust.res0.0480.0040.050
flowMerge-package0.7560.0040.759
flowObj0.6880.0040.693
map0.0040.0000.004
merge-methods0.6920.0040.696
merge0.6840.0080.691
pFlowMerge13.293 0.00013.290
plot-methods0.7480.0040.751
updateU0.8920.0120.905