flowClust 2.6.0
Raphael Gottardo
| Snapshot Date: 2010-10-04 11:22:20 -0700 (Mon, 04 Oct 2010) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_6/madman/Rpacks/flowClust | | Last Changed Rev: 47149 / Revision: 49923 | | Last Changed Date: 2010-05-26 11:24:55 -0700 (Wed, 26 May 2010) |
| wilson1 | Linux (openSUSE 11.1) / x86_64 | OK | WARNINGS | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | WARNINGS | OK |
| gewurz | Windows Server 2008 R2 Enterprise (64-bit) / x64 | [ OK ] | WARNINGS | OK |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | WARNINGS | OK |
* checking for file 'flowClust/DESCRIPTION' ... OK
* preparing 'flowClust':
* checking DESCRIPTION meta-information ... OK
* cleaning src
make: Nothing to be done for `clean'.
* installing the package to re-build vignettes
* installing *source* package 'flowClust' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
making DLL ...
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -ID:/biocbld/bbs-2.6-bioc/R/src/include -IC:/GSL_test64/include -O2 -Wall -std=gnu99 -c BoxCox.c -o BoxCox.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -ID:/biocbld/bbs-2.6-bioc/R/src/include -IC:/GSL_test64/include -O2 -Wall -std=gnu99 -c Nu.c -o Nu.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -ID:/biocbld/bbs-2.6-bioc/R/src/include -IC:/GSL_test64/include -O2 -Wall -std=gnu99 -c flowClust.c -o flowClust.o
flowClust.c: In function 'flowClust':
flowClust.c:49: warning: 's' may be used uninitialized in this function
flowClust.c:49: warning: 's2' may be used uninitialized in this function
flowClust.c:51: warning: 's3' may be used uninitialized in this function
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -ID:/biocbld/bbs-2.6-bioc/R/src/include -IC:/GSL_test64/include -O2 -Wall -std=gnu99 -c flowClustGaussian.c -o flowClustGaussian.o
flowClustGaussian.c: In function 'flowClustGaussian':
flowClustGaussian.c:34: warning: 's' may be used uninitialized in this function
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.6-bioc/R/include" -ID:/biocbld/bbs-2.6-bioc/R/src/include -IC:/GSL_test64/include -O2 -Wall -std=gnu99 -c ranMVNT.c -o ranMVNT.o
x86_64-w64-mingw32-gcc -shared -s -static-libgcc -o flowClust.dll tmp.def BoxCox.o Nu.o flowClust.o flowClustGaussian.o ranMVNT.o -LC:/GSL_test64/lib -lgsl -lgslcblas -lm -LD:/biocbld/bbs-2.6-bioc/R/bin -lR
Info: resolving _gsl_root_fsolver_brent by linking to __imp__gsl_root_fsolver_brent (auto-import)
Info: resolving _gsl_min_fminimizer_brent by linking to __imp__gsl_min_fminimizer_brent (auto-importc:/rtools211/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/4.4.4/../../../../x86_64-w64-mingw32/bin/ld.exe: warning: auto-importing has been activated without --enable-auto-import specified on the command line.
This should work unless it involves constant data structures referencing symbols from auto-imported DLLs.)
installing to D:/biocbld/bbs-2.6-bioc/tmpdir/Rinst438099194/flowClust/libs/x64
... done
** R
** data
** inst
** preparing package for lazy loading
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: rrcov
Loading required package: robustbase
Loading required package: pcaPP
Loading required package: mvtnorm
Scalable Robust Estimators with High Breakdown Point (version 1.1-00)
Attaching package: 'flowCore'
The following object(s) are masked from 'package:stats':
alias, filter
Warning: Class "Ulist" is defined (with package slot 'rrcov') but no metadata object found to revise subclass information---not exported? Making a copy in package 'flowClust'
Warning: Class "Uvector" is defined (with package slot 'rrcov') but no metadata object found to revise subclass information---not exported? Making a copy in package 'flowClust'
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
* DONE (flowClust)
* creating vignettes ... OK
* cleaning src
make: Nothing to be done for `clean'.
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'flowClust_2.6.0.tar.gz'