RdbiPgSQL 1.22.0
Jianhua Zhang
| Snapshot Date: 2010-10-04 11:22:20 -0700 (Mon, 04 Oct 2010) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_6/madman/Rpacks/RdbiPgSQL | | Last Changed Rev: 46401 / Revision: 49923 | | Last Changed Date: 2010-04-22 11:21:23 -0700 (Thu, 22 Apr 2010) |
| wilson1 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | N O T S U P P O R T E D |
| gewurz | Windows Server 2008 R2 Enterprise (64-bit) / x64 | N O T S U P P O R T E D |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | [ OK ] |
INSTALLATION WITH 'R CMD INSTALL --preclean --library=RdbiPgSQL.buildbin-libdir RdbiPgSQL_1.22.0.tar.gz'
* installing *source* package ‘RdbiPgSQL’ ...
creating cache ./config.cache
checking for PQconnectdb in -lpq... yes
checking how to run the C preprocessor... cc -E
checking for /usr/include/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/include/pgsql/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/include/postgresql/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/local/include/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/local/include/pgsql/libpq-fe.h... yes
updating cache ./config.cache
creating ./config.status
creating src/Makevars
** libs
*** arch - i386
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include/i386 -I/usr/local/include/pgsql -I/usr/local/include -fPIC -g -O2 -Wall -pedantic -c PgSQL.c -o PgSQL.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include/i386 -I/usr/local/include/pgsql -I/usr/local/include -fPIC -g -O2 -Wall -pedantic -c PgSQLInit.c -o PgSQLInit.o
PgSQL.h:9: warning: ‘mkInteger’ defined but not used
PgSQL.h:18: warning: ‘mkLogical’ defined but not used
PgSQL.h:27: warning: ‘mkString_safe’ defined but not used
PgSQL.h:33: warning: ‘fetchPgString’ defined but not used
PgSQL.h:46: warning: ‘fetchPgInteger’ defined but not used
PgSQL.h:66: warning: ‘fetchPgDouble’ defined but not used
PgSQL.h:89: warning: ‘fetchPgLogical’ defined but not used
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o RdbiPgSQL.so PgSQL.o PgSQLInit.o -lpq -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.6-bioc/meat/RdbiPgSQL.buildbin-libdir/RdbiPgSQL/libs/i386
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
* DONE (RdbiPgSQL)
INSTALLATION OF ppc LIBS WITH 'R_ARCH=/ppc R CMD INSTALL --preclean --library=RdbiPgSQL.buildbin-libdir --libs-only RdbiPgSQL_1.22.0.tar.gz'
* installing *source* package ‘RdbiPgSQL’ ...
creating cache ./config.cache
checking for PQconnectdb in -lpq... yes
checking how to run the C preprocessor... cc -E
checking for /usr/include/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/include/pgsql/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/include/postgresql/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/local/include/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/local/include/pgsql/libpq-fe.h... yes
updating cache ./config.cache
creating ./config.status
creating src/Makevars
** libs
*** arch - ppc
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include/ppc -I/usr/local/include/pgsql -I/usr/local/include -fPIC -g -O2 -Wall -pedantic -c PgSQL.c -o PgSQL.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include/ppc -I/usr/local/include/pgsql -I/usr/local/include -fPIC -g -O2 -Wall -pedantic -c PgSQLInit.c -o PgSQLInit.o
PgSQL.h:9: warning: ‘mkInteger’ defined but not used
PgSQL.h:18: warning: ‘mkLogical’ defined but not used
PgSQL.h:27: warning: ‘mkString_safe’ defined but not used
PgSQL.h:33: warning: ‘fetchPgString’ defined but not used
PgSQL.h:46: warning: ‘fetchPgInteger’ defined but not used
PgSQL.h:66: warning: ‘fetchPgDouble’ defined but not used
PgSQL.h:89: warning: ‘fetchPgLogical’ defined but not used
gcc -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o RdbiPgSQL.so PgSQL.o PgSQLInit.o -lpq -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.6-bioc/meat/RdbiPgSQL.buildbin-libdir/RdbiPgSQL/libs/ppc
* DONE (RdbiPgSQL)
INSTALLATION OF x86_64 LIBS WITH 'R_ARCH=/x86_64 R CMD INSTALL --preclean --library=RdbiPgSQL.buildbin-libdir --libs-only RdbiPgSQL_1.22.0.tar.gz'
* installing *source* package ‘RdbiPgSQL’ ...
creating cache ./config.cache
checking for PQconnectdb in -lpq... yes
checking how to run the C preprocessor... cc -E
checking for /usr/include/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/include/pgsql/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/include/postgresql/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/local/include/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/local/include/pgsql/libpq-fe.h... yes
updating cache ./config.cache
creating ./config.status
creating src/Makevars
** libs
*** arch - x86_64
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include/x86_64 -I/usr/local/include/pgsql -I/usr/local/include -fPIC -g -O2 -Wall -pedantic -c PgSQL.c -o PgSQL.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include/x86_64 -I/usr/local/include/pgsql -I/usr/local/include -fPIC -g -O2 -Wall -pedantic -c PgSQLInit.c -o PgSQLInit.o
PgSQL.h:9: warning: ‘mkInteger’ defined but not used
PgSQL.h:18: warning: ‘mkLogical’ defined but not used
PgSQL.h:27: warning: ‘mkString_safe’ defined but not used
PgSQL.h:33: warning: ‘fetchPgString’ defined but not used
PgSQL.h:46: warning: ‘fetchPgInteger’ defined but not used
PgSQL.h:66: warning: ‘fetchPgDouble’ defined but not used
PgSQL.h:89: warning: ‘fetchPgLogical’ defined but not used
gcc -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o RdbiPgSQL.so PgSQL.o PgSQLInit.o -lpq -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
ld warning: in /usr/local/lib/libpq.dylib, missing required architecture x86_64 in file
installing to /Users/biocbuild/bbs-2.6-bioc/meat/RdbiPgSQL.buildbin-libdir/RdbiPgSQL/libs/x86_64
* DONE (RdbiPgSQL)