DNAcopy 1.22.1
Venkatraman E. Seshan
| Snapshot Date: 2010-10-04 11:22:20 -0700 (Mon, 04 Oct 2010) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_6/madman/Rpacks/DNAcopy | | Last Changed Rev: 46873 / Revision: 49923 | | Last Changed Date: 2010-05-14 13:34:58 -0700 (Fri, 14 May 2010) |
| wilson1 | Linux (openSUSE 11.1) / x86_64 | [ OK ] | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| gewurz | Windows Server 2008 R2 Enterprise (64-bit) / x64 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* checking for file 'DNAcopy/DESCRIPTION' ... OK
* preparing 'DNAcopy':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* installing *source* package 'DNAcopy' ...
** libs
gfortran -fpic -g -O -c cbsWtstats.f -o cbsWtstats.o
gfortran -fpic -g -O -c cbststats.f -o cbststats.o
gfortran -fpic -g -O -c changepoints-wtd.f -o changepoints-wtd.o
gfortran -fpic -g -O -c changepoints.f -o changepoints.o
gfortran -fpic -g -O -c esegment.f -o esegment.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.6-bioc/R/include -I/usr/local/include -fpic -g -O2 -c flchoose.c -o flchoose.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.6-bioc/R/include -I/usr/local/include -fpic -g -O2 -c fphyper.c -o fphyper.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.6-bioc/R/include -I/usr/local/include -fpic -g -O2 -c fpnorm.c -o fpnorm.o
gfortran -fpic -g -O -c getbdry.f -o getbdry.o
gfortran -fpic -g -O -c prune.f -o prune.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.6-bioc/R/include -I/usr/local/include -fpic -g -O2 -c rshared.c -o rshared.o
gfortran -fpic -g -O -c segmentp.f -o segmentp.o
gfortran -fpic -g -O -c smoothCNA.f -o smoothCNA.o
gfortran -fpic -g -O -c tailprobs.f -o tailprobs.o
gcc -std=gnu99 -shared -L/usr/local/lib64 -o DNAcopy.so cbsWtstats.o cbststats.o changepoints-wtd.o changepoints.o esegment.o flchoose.o fphyper.o fpnorm.o getbdry.o prune.o rshared.o segmentp.o smoothCNA.o tailprobs.o -lgfortran -lm -L/home/biocbuild/bbs-2.6-bioc/R/lib -lR
installing to /tmp/Rinst1368661305/DNAcopy/libs
** R
** data
** moving datasets to lazyload DB
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
* DONE (DNAcopy)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'DNAcopy_1.22.1.tar.gz'