* checking for file 'DEGseq/DESCRIPTION' ... OK
* preparing 'DEGseq':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* installing *source* package 'DEGseq' ...
** libs
g++ -I/home/biocbuild/bbs-2.6-bioc/R/include -I/usr/local/include -fpic -g -O2 -c getGeneExp.cpp -o getGeneExp.o
g++ -shared -L/usr/local/lib64 -o DEGseq.so getGeneExp.o -L/home/biocbuild/bbs-2.6-bioc/R/lib -lR
installing to /tmp/Rinst2260217335/DEGseq/libs
** R
** inst
** preparing package for lazy loading
Loading required package: tcltk
Loading Tcl/Tk interface ... done
Loading required package: IRanges
Attaching package: 'IRanges'
The following object(s) are masked from 'package:base':
Map, cbind, mapply, order, paste, pmax, pmax.int, pmin, pmin.int,
rbind, rep.int, table
Loading required package: GenomicRanges
Loading required package: Biostrings
Loading required package: lattice
Loading required package: Rsamtools
Loading required package: impute
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
* DONE (DEGseq)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'DEGseq_1.2.2.tar.gz'