Package: CGHnormaliter

Version: 1.2.0

Command: /home/biocbuild/bbs-2.6-bioc/R/bin/R CMD build CGHnormaliter

StartedAt: 2010-10-04 14:56:16 -0700 (Mon, 04 Oct 2010)

EndedAt: 2010-10-04 14:56:59 -0700 (Mon, 04 Oct 2010)

EllapsedTime: 42.5 seconds

RetCode: 0

Status:  OK

PackageFile: CGHnormaliter_1.2.0.tar.gz

PackageFileSize: 829.4 KiB

* checking for file 'CGHnormaliter/DESCRIPTION' ... OK
* preparing 'CGHnormaliter':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* installing *source* package 'CGHnormaliter' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: impute
Loading required package: DNAcopy

**************************************************************************
   The data format for the CNA object will be changed in version 1.23.0 
     Instead of a data frame it will be a list of 3 (or more) objects 
     chrom and maploc will be vectors and CN/LOH data will be a matrix 
**************************************************************************

Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: CGHbase
Loading required package: marray
Loading required package: limma

Attaching package: 'CGHcall'

The following object(s) are masked from 'package:CGHbase':

    bpend, bpstart, calls, calls<-, chromosomes, copynumber,
    copynumber<-, probamp, probamp<-, probgain, probgain<-, probloss,
    probloss<-, probnorm, probnorm<-, segmented, segmented<-

** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (CGHnormaliter)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'CGHnormaliter_1.2.0.tar.gz'