* checking for file 'BufferedMatrix/DESCRIPTION' ... OK
* preparing 'BufferedMatrix':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* installing *source* package 'BufferedMatrix' ...
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-2.6-bioc/R/include -I/usr/local/include -fpic -g -O2 -c RBufferedMatrix.c -o RBufferedMatrix.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.6-bioc/R/include -I/usr/local/include -fpic -g -O2 -c doubleBufferedMatrix.c -o doubleBufferedMatrix.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.6-bioc/R/include -I/usr/local/include -fpic -g -O2 -c doubleBufferedMatrix_C_tests.c -o doubleBufferedMatrix_C_tests.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.6-bioc/R/include -I/usr/local/include -fpic -g -O2 -c init_package.c -o init_package.o
gcc -std=gnu99 -shared -L/usr/local/lib64 -o BufferedMatrix.so RBufferedMatrix.o doubleBufferedMatrix.o doubleBufferedMatrix_C_tests.o init_package.o -L/home/biocbuild/bbs-2.6-bioc/R/lib -lR
installing to /tmp/Rinst295438041/BufferedMatrix/libs
** R
** inst
** preparing package for lazy loading
Creating a generic for 'rowMeans' in package 'BufferedMatrix'
(the supplied definition differs from and overrides the implicit generic
in package 'base': Formal arguments differ (in default values?))
Creating a generic for 'rowSums' in package 'BufferedMatrix'
(the supplied definition differs from and overrides the implicit generic
in package 'base': Formal arguments differ (in default values?))
Creating a generic for 'colMeans' in package 'BufferedMatrix'
(the supplied definition differs from and overrides the implicit generic
in package 'base': Formal arguments differ (in default values?))
Creating a generic for 'colSums' in package 'BufferedMatrix'
(the supplied definition differs from and overrides the implicit generic
in package 'base': Formal arguments differ (in default values?))
Creating a new generic function for "ncol" in "BufferedMatrix"
Creating a new generic function for "nrow" in "BufferedMatrix"
Creating a new generic function for "mean" in "BufferedMatrix"
Creating a new generic function for "as.matrix" in "BufferedMatrix"
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
* DONE (BufferedMatrix)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'BufferedMatrix_1.12.0.tar.gz'