Package: pumadata

Version: 1.0.3

Command: /Library/Frameworks/R.framework/Versions/2.10/Resources/bin/R CMD check --no-vignettes pumadata_1.0.3.tar.gz

StartedAt: 2010-04-02 15:06:39 -0700 (Fri, 02 Apr 2010)

EndedAt: 2010-04-02 15:08:34 -0700 (Fri, 02 Apr 2010)

EllapsedTime: 115.2 seconds

RetCode: 0

Status: WARNINGS

CheckDir: pumadata.Rcheck

Warnings: 1

* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.5-data-experiment/meat/pumadata.Rcheck'
* using R version 2.10.1 Patched (2009-12-14 r50738)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'pumadata/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'pumadata' version '1.0.3'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'pumadata' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... WARNING
Invalid citation information in 'inst/CITATION':
  Error in data.frame(File = file, Entry = entries, stringsAsFactors = FALSE) : 
    arguments imply differing number of rows: 1, 0
  Calls: <Anonymous> -> get_CITATION_entry_fields -> data.frame
  Execution halted
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

WARNING: There was 1 warning, see
  /Users/biocbuild/bbs-2.5-data-experiment/meat/pumadata.Rcheck/00check.log
for details

* install options are ' --no-html'

* installing *source* package ‘pumadata’ ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
*** installing help indices
** building package indices ...
* DONE (pumadata)