beadarray 1.14.0
Mark Dunning
| Snapshot Date: 2009-12-13 23:30:35 -0800 (Sun, 13 Dec 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_5/madman/Rpacks/beadarray | | Last Changed Rev: 42684 / Revision: 43539 | | Last Changed Date: 2009-10-27 16:33:29 -0700 (Tue, 27 Oct 2009) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | [ OK ] |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* installing *source* package 'beadarray' ...
Using auto-selected zip option '--use-zip-data'
** libs
making DLL ...
gcc -I"E:/biocbld/bbs-2.5-bioc/R/include" -O3 -Wall -std=gnu99 -c BASH.c -o BASH.o
gcc -I"E:/biocbld/bbs-2.5-bioc/R/include" -O3 -Wall -std=gnu99 -c BLImagePlot.c -o BLImagePlot.o
gcc -I"E:/biocbld/bbs-2.5-bioc/R/include" -O3 -Wall -std=gnu99 -c HULK.c -o HULK.o
gcc -I"E:/biocbld/bbs-2.5-bioc/R/include" -O3 -Wall -std=gnu99 -c createBeadSummaryData.c -o createBeadSummaryData.o
createBeadSummaryData.c: In function 'findAllOutliers':
createBeadSummaryData.c:223: warning: 'status' may be used uninitialized in this function
gcc -I"E:/biocbld/bbs-2.5-bioc/R/include" -O3 -Wall -std=gnu99 -c findProbeIndices.c -o findProbeIndices.o
gcc -I"E:/biocbld/bbs-2.5-bioc/R/include" -O3 -Wall -std=gnu99 -c readBeadImages.c -o readBeadImages.o
readBeadImages.c: In function 'getPixelIntensities':
readBeadImages.c:368: warning: unused variable 'result'
readBeadImages.c: In function 'calculateBackground':
readBeadImages.c:493: warning: unused variable 'temp'
readBeadImages.c:491: warning: unused variable 'cY'
readBeadImages.c:491: warning: unused variable 'cX'
readBeadImages.c:490: warning: unused variable 'opt4'
readBeadImages.c:490: warning: unused variable 'opt3'
readBeadImages.c:490: warning: unused variable 'opt2'
readBeadImages.c:490: warning: unused variable 'opt1'
readBeadImages.c:490: warning: unused variable 'yc'
readBeadImages.c:490: warning: unused variable 'xc'
readBeadImages.c:489: warning: unused variable 'dist'
readBeadImages.c: In function 'readBeadImage':
readBeadImages.c:626: warning: 'offset' may be used uninitialized in this function
readBeadImages.c:626: warning: 'records' may be used uninitialized in this function
readBeadImages.c:625: warning: 'StripOffset' may be used uninitialized in this function
readBeadImages.c:625: warning: 'ImageHeight' may be used uninitialized in this function
readBeadImages.c:625: warning: 'ImageWidth' may be used uninitialized in this function
readBeadImages.c:625: warning: 'BeginData' may be used uninitialized in this function
gcc -shared -s -o beadarray.dll tmp.def BASH.o BLImagePlot.o HULK.o createBeadSummaryData.o findProbeIndices.o readBeadImages.o -LE:/biocbld/bbs-2.5-bioc/R/bin -lR
... done
** R
** data
** inst
** preparing package for lazy loading
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
** help
*** installing help indices
** building package indices ...
** MD5 sums
packaged installation of 'beadarray' as beadarray_1.14.0.zip
* DONE (beadarray)