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Package 15/294HostnameOS / ArchBUILDCHECKBUILD BIN
affypdnn 1.16.0
Laurent Gautier
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/affypdnn
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK [ OK ]
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: affypdnn
Version: 1.16.0
Command: /home/biocbuild/bbs-2.3-bioc/R/bin/R CMD check --no-vignettes affypdnn_1.16.0.tar.gz
StartedAt: 2009-04-18 14:43:09 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 14:47:00 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 231.5 seconds
RetCode: 0
Status: OK
CheckDir: affypdnn.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.3-bioc/meat/affypdnn.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: UTF-8
* checking for file 'affypdnn/DESCRIPTION' ... OK
* this is package 'affypdnn' version '1.16.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'affypdnn' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating affypdnn-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating affypdnn-manual.tex ... OK
* checking affypdnn-manual.tex using pdflatex ... OK

affypdnn.Rcheck/00install.out:

* Installing *source* package 'affypdnn' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
 >>> Building/Updating help pages for package 'affypdnn'
     Formats: text html latex example 
  chiptype.pdnn.params              text    html    latex   example
  expressopdnn                      text    html    latex   example
  find.params.pdnn                  text    html    latex   example
  generateExprVal.method.pdnn       text    html    latex   example
  matplotProbesPDNN                 text    html    latex   example
  params.dilution                   text    html    latex   example
  pdnn.params.chiptype              text    html    latex   example
  transform.ProbeSet                text    html    latex   example
** building package indices ...
* DONE (affypdnn)