Package: ccTutorial

Version: 0.9.9

Command: /Library/Frameworks/R.framework/Versions/2.7/Resources/bin/R CMD check ccTutorial_0.9.9.tar.gz

StartedAt: 2008-10-16 13:29:04 -0700 (Thu, 16 Oct 2008)

EndedAt: 2008-10-16 13:42:58 -0700 (Thu, 16 Oct 2008)

EllapsedTime: 834.2 seconds

RetCode: 0

Status: OK

CheckDir: ccTutorial.Rcheck

Warnings: 0

* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.2-data-experiment/meat/ccTutorial.Rcheck'
* using R version 2.7.2 (2008-08-25)
* using session charset: ASCII
* checking for file 'ccTutorial/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'ccTutorial' version '0.9.9'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'ccTutorial' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating ccTutorial-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating ccTutorial-manual.tex ... OK
* checking ccTutorial-manual.tex using pdflatex ... OK

* Installing *source* package 'ccTutorial' ...
** R
** data
** inst
** help
 >>> Building/Updating help pages for package 'ccTutorial'
     Formats: text html latex example 
  X                                 text    html    latex   example
  arrayGenesToProbeSets             text    html    latex   example
  barreraExpressionX                text    html    latex   example
  ccTutorial-package                text    html    latex
  chersX                            text    html    latex   example
  mm9g2p                            text    html    latex   example
  mm9gene2GO                        text    html    latex   example
  mm9genes                          text    html    latex   example
  probeAnno                         text    html    latex   example
** building package indices ...
* DONE (ccTutorial)