rHVDM 1.5.1
Martino Barenco
| Snapshot Date: 2008-04-09 00:13:10 -0700 (Wed, 09 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/rHVDM | | Last Changed Rev: 30582 / Revision: 30951 | | Last Changed Date: 2008-03-19 07:15:52 -0700 (Wed, 19 Mar 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | WARNINGS | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | WARNINGS | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | [ WARNINGS ] | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | WARNINGS | OK |
| pelham | Mac OS X Leopard (10.5.1) / i386 | OK | WARNINGS | OK |
* checking for working pdflatex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.2-bioc/meat/rHVDM.Rcheck'
* using R version 2.7.0 beta (2008-04-07 r45159)
* using session charset: ISO8859-1
* checking for file 'rHVDM/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'rHVDM' version '1.5.1'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'rHVDM' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
.returnplattidnumber: no visible binding for global variable
'rHVDMplattforms'
.returnsupportedplattforms: no visible binding for global variable
'rHVDMplattforms'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... WARNING
Functions/methods with usage in documentation object 'estimerrors' but not in code:
estimerrors
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating rHVDM-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating rHVDM-manual.tex ... OK
* checking rHVDM-manual.tex using pdflatex ... OK
WARNING: There was 1 warning, see
/loc/home/biocbuild/bbs-2.2-bioc/meat/rHVDM.Rcheck/00check.log
for details
* Installing *source* package 'rHVDM' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: R2HTML
Loading required package: affy
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: affyio
Loading required package: preprocessCore
Loading required package: minpack.lm
This product includes software developed by the University of Chicago, as
Operator of Argonne National Laboratory.
See the LICENSE file distributed with the minpack.lm source code or
http://www.netlib.org/minpack/disclaimer for the full license.
** help
>>> Building/Updating help pages for package 'rHVDM'
Formats: text html latex example
HVDMcheck text html latex example
HVDMreport text html latex example
estimerrors text html latex example
fitgene text html latex example
fiveGyMAS5 text html latex
genestoscreen text html latex
p53traingenes text html latex
rHVDMplattforms text html latex
screening text html latex example
training text html latex example
** building package indices ...
* DONE (rHVDM)