macat 1.13.3
Joern Toedling
| Snapshot Date: 2008-04-09 00:13:10 -0700 (Wed, 09 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/macat | | Last Changed Rev: 30363 / Revision: 30951 | | Last Changed Date: 2008-03-04 13:18:09 -0800 (Tue, 04 Mar 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | [ OK ] | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.1) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.2-bioc/meat/macat.Rcheck'
* using R version 2.7.0 beta (2008-04-07 r45159)
* using session charset: ISO8859-1
* checking for file 'macat/DESCRIPTION' ... OK
* this is package 'macat' version '1.13.3'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'macat' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
myhtml: no visible global function definition for 'getTDRows'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating macat-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating macat-manual.tex ... OK
* checking macat-manual.tex using pdflatex ... OK
* Installing *source* package 'macat' ...
** R
** data
** demo
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: xtable
** help
>>> Building/Updating help pages for package 'macat'
Formats: text html latex example
buildMACAT text html latex example
compute_sliding text html latex example
discreteKernelize text html latex example
discretize text html latex
discretizeAll text html latex example
discretize_tscores text html latex example
evalScoring text html latex example
evaluateParameters text html latex example
get_results text html latex example
html text html latex
kernelize text html latex example
kernelizeAll text html latex example
kernelizeToPython text html latex example
kernels text html latex example
loaddatapkg text html latex example
macat-internal text html latex
plot_MACATevalScoring text html latex example
preprocessedLoader text html latex example
pythondata text html latex example
scoring text html latex example
stjd text html latex example
** building package indices ...
* DONE (macat)