simpleaffy 2.15.02
Crispin Miller
| Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/simpleaffy | | Last Changed Rev: 27998 / Revision: 29143 | | Last Changed Date: 2007-10-15 07:27:27 -0700 (Mon, 15 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | [ OK ] | OK | OK |
| lemming | Windows Server 2003 (32-bit) / x64 | OK | OK | OK |
* checking for file 'simpleaffy/DESCRIPTION' ... OK
* preparing 'simpleaffy':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
installing R.css in E:/biocbld/bbs-2.2-bioc/tmpdir/Rinst604035040
---------- Making package simpleaffy ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
making DLL ...
making simpleaffy.d from simpleaffy.c
gcc-sjlj -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c simpleaffy.c -o simpleaffy.o
windres --preprocessor="gcc-sjlj -E -xc -DRC_INVOKED" -I e:/biocbld/bbs-2.2-bioc/R/include -i simpleaffy_res.rc -o simpleaffy_res.o
gcc-sjlj -std=gnu99 -shared -s -o simpleaffy.dll simpleaffy.def simpleaffy.o simpleaffy_res.o -Le:/biocbld/bbs-2.2-bioc/R/bin -lR
... DLL made
installing DLL
installing R files
installing inst files
installing data files
preparing package simpleaffy for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: affyio
Loading required package: preprocessCore
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: gcrma
Loading required package: matchprobes
installing man source files
installing indices
not zipping data
installing help
Note: removing empty section \seealso
Note: removing empty section \seealso
Note: removing empty section \details
Note: removing empty section \details
Note: removing empty section \seealso
Note: removing empty section \seealso
Note: removing empty section \note
Note: removing empty section \note
Note: removing empty section \note
Note: removing empty section \note
Note: removing empty section \note
Note: removing empty section \note
Note: removing empty section \note
Note: removing empty section \note
Note: removing empty section \note
Note: removing empty section \note
Note: removing empty section \note
Note: removing empty section \note
Note: removing empty section \note
Note: removing empty section \arguments
Note: removing empty section \note
Note: removing empty section \arguments
Note: removing empty section \note
Note: removing empty section \note
Note: removing empty section \details
Note: removing empty section \details
Note: removing empty section \details
Note: removing empty section \details
Note: removing empty section \note
Note: removing empty section \note
Note: removing empty section \value
Note: removing empty section \note
Note: removing empty section \value
Note: removing empty section \note
>>> Building/Updating help pages for package 'simpleaffy'
Formats: text html latex example chm
PairComp-class text html latex chm
QCStats-class text html latex chm
all.present text html latex example chm
all.present.in.group text html latex example chm
bg.correct.sa text html latex example chm
call.exprs text html latex example chm
detection.p.val text html latex example chm
get.annotation text html latex example chm
get.array.indices text html latex example chm
get.array.subset text html latex example chm
get.array.subset.affy text html latex example chm
get.fold.change.and.t.test text html latex example chm
hmap.colors text html latex example chm
hmap.eset text html latex example chm
hmap.pc text html latex example chm
journalpng text html latex example chm
justMAS text html latex example chm
pairwise.comparison text html latex example chm
pairwise.filter text html latex example chm
plot.pairwise.comparison text html latex example chm
plot.qc.stats text html latex example chm
qc text html latex example chm
qc.affy text html latex example chm
qc.get.alpha1 text html latex example chm
qc.get.array text html latex example chm
qc.get.probes text html latex example chm
qc.get.ratios text html latex example chm
qc.get.spikes text html latex example chm
qc.have.params text html latex example chm
qc.ok text html latex example chm
qc.read.file text html latex example chm
qc.stats text html latex example chm
read.affy text html latex example chm
read.affy.mixed text html latex example chm
setQCEnvironment text html latex example chm
simpleaffy-deprecated text html latex example chm
standard.pearson text html latex example chm
trad.scatter.plot text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.2-bioc\meat\simpleaffy\chm\simpleaffy.chm
Compile time: 0 minutes, 1 second
39 Topics
230 Local links
11 Internet links
1 Graphic
Created e:\biocbld\bbs-2.2-bioc\meat\simpleaffy\chm\simpleaffy.chm, 64,695 bytes
Compression decreased file by 97,560 bytes.
adding MD5 sums
* DONE (simpleaffy)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'simpleaffy_2.15.02.tar.gz'