qvalue 1.13.0
John D. Storey
| Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/qvalue | | Last Changed Rev: 27716 / Revision: 29143 | | Last Changed Date: 2007-10-02 18:16:39 -0700 (Tue, 02 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | [ OK ] | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| lemming | Windows Server 2003 (32-bit) / x64 | OK | OK | OK |
* checking for working latex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.2-bioc/meat/qvalue.Rcheck'
* using R version 2.7.0 Under development (unstable) (2007-12-09 r43632)
* checking for file 'qvalue/DESCRIPTION' ... OK
* this is package 'qvalue' version '1.13.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'qvalue' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating qvalue-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... NOTE
--- running texi2dvi on vignettes
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './qvalue.tex' ...
LaTeX Warning: Citation `storey:tibs:2003' on page 1 undefined on input line 50
LaTeX Warning: Citation `hedenfalk:etal:2001' on page 1 undefined on input line
LaTeX Warning: Citation `storey:tibs:2003' on page 1 undefined on input line 65
LaTeX Warning: Citation `storey:tibs:2003' on page 2 undefined on input line 13
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './qvalue.tex' ...
LaTeX Warning: Citation `storey:tibs:2003' on page 1 undefined on input line 50
LaTeX Warning: Citation `hedenfalk:etal:2001' on page 1 undefined on input line
LaTeX Warning: Citation `storey:tibs:2003' on page 1 undefined on input line 65
LaTeX Warning: Citation `storey:tibs:2003' on page 3 undefined on input line 13
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './qvalue.tex' ...
* creating qvalue-manual.tex ... OK
* checking qvalue-manual.tex ... OK
/loc/home/biocbuild/bbs-2.2-bioc/meat/qvalue.Rcheck
* Installing *source* package 'qvalue' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: tcltk
Loading Tcl/Tk interface ... done
** help
>>> Building/Updating help pages for package 'qvalue'
Formats: text html latex example
hedenfalk text html latex
qplot text html latex example
qsummary text html latex example
qvalue.gui text html latex example
qvalue text html latex example
qwrite text html latex example
** building package indices ...
* DONE (qvalue)