quantsmooth 1.5.0
Jan Oosting
| Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/quantsmooth | | Last Changed Rev: 27716 / Revision: 29143 | | Last Changed Date: 2007-10-02 18:16:39 -0700 (Tue, 02 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| lemming | Windows Server 2003 (32-bit) / x64 | OK | [ OK ] | OK |
* checking for working latex ... OK
* using log directory 'D:/biocbld/bbs-2.2-bioc/meat/quantsmooth.Rcheck'
* using R version 2.7.0 Under development (unstable) (2007-12-06 r43609)
* checking for file 'quantsmooth/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'quantsmooth' version '1.5.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'quantsmooth' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
lengthChromosome: no visible binding for global variable 'chrom.bands'
paintCytobands: no visible binding for global variable 'chrom.bands'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating quantsmooth-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating quantsmooth-manual.tex ... OK
* checking quantsmooth-manual.tex ... OK
installing R.css in D:/biocbld/bbs-2.2-bioc/meat/quantsmooth.Rcheck
---------- Making package quantsmooth ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
installing data files
installing man source files
installing indices
not zipping data
installing help
Note: removing empty section \value
Note: removing empty section \value
Note: removing empty section \details
Note: removing empty section \details
Note: removing empty section \details
Note: removing empty section \details
Note: removing empty section \details
Note: removing empty section \details
Note: removing empty section \details
Note: removing empty section \details
>>> Building/Updating help pages for package 'quantsmooth'
Formats: text html latex example chm
Chromosome14 text html latex chm
drawSimpleChrom text html latex example chm
getChangedIdx text html latex chm
getChangedRegions text html latex example chm
getLambdaMin text html latex example chm
lengthChromosome text html latex example chm
numericCHR text html latex example chm
paintCytobands text html latex example chm
plotChromosome text html latex chm
plotSmoothed text html latex example chm
prepareGenomePlot text html latex chm
quantsmooth text html latex example chm
quantsmooth.cv text html latex example chm
quantsmooth.seg text html latex example chm
scaleto text html latex chm
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\bbs-2.2-bioc\meat\quantsmooth.Rcheck\00_pkg_src\quantsmooth\chm\quantsmooth.chm
Compile time: 0 minutes, 0 seconds
16 Topics
47 Local links
0 Internet links
1 Graphic
Created d:\biocbld\bbs-2.2-bioc\meat\quantsmooth.Rcheck\00_pkg_src\quantsmooth\chm\quantsmooth.chm, 30,354 bytes
Compression decreased file by 16,038 bytes.
adding MD5 sums
* DONE (quantsmooth)