explorase 1.3.0
Michael Lawrence
| Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/explorase | | Last Changed Rev: 28198 / Revision: 29143 | | Last Changed Date: 2007-10-24 12:05:01 -0700 (Wed, 24 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | [ OK ] | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| lemming | Windows Server 2003 (32-bit) / x64 | OK | OK | OK |
* checking for working latex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.2-bioc/meat/explorase.Rcheck'
* using R version 2.7.0 Under development (unstable) (2007-12-09 r43632)
* checking for file 'explorase/DESCRIPTION' ... OK
* this is package 'explorase' version '1.3.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'explorase' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating explorase-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... NOTE
--- running texi2dvi on vignettes
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './explorase.tex' ...
Package natbib Warning: Citation `Limma' on page 1 undefined on input line 47.
Package natbib Warning: Citation `metnet' on page 4 undefined on input line 130
Package natbib Warning: Citation `explorase-website' on page 7 undefined on inp
Package natbib Warning: Citation `explorase-website' on page 8 undefined on inp
Package natbib Warning: Citation `cytoscape' on page 11 undefined on input line
Package natbib Warning: Citation `Limma' on page 12 undefined on input line 504
Package natbib Warning: Citation `rattle' on page 12 undefined on input line 51
Package natbib Warning: Citation `RGtk2-website' on page 12 undefined on input
Package natbib Warning: Citation `GTK' on page 12 undefined on input line 526.
Package natbib Warning: Citation `rggobi-website' on page 12 undefined on input
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './explorase.tex' ...
Package natbib Warning: Citation `Limma' on page 1 undefined on input line 47.
Package natbib Warning: Citation `metnet' on page 4 undefined on input line 130
Package natbib Warning: Citation `explorase-website' on page 7 undefined on inp
Package natbib Warning: Citation `explorase-website' on page 8 undefined on inp
Package natbib Warning: Citation `cytoscape' on page 11 undefined on input line
Package natbib Warning: Citation `Limma' on page 12 undefined on input line 504
Package natbib Warning: Citation `rattle' on page 12 undefined on input line 51
Package natbib Warning: Citation `RGtk2-website' on page 12 undefined on input
Package natbib Warning: Citation `GTK' on page 12 undefined on input line 526.
Package natbib Warning: Citation `rggobi-website' on page 12 undefined on input
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './explorase.tex' ...
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './explorase.tex' ...
* creating explorase-manual.tex ... OK
* checking explorase-manual.tex ... OK
/loc/home/biocbuild/bbs-2.2-bioc/meat/explorase.Rcheck
* Installing *source* package 'explorase' ...
** R
** inst
** preparing package for lazy loading
Loading required package: rggobi
Loading required package: RGtk2
Loading required package: limma
** help
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>>> Building/Updating help pages for package 'explorase'
Formats: text html latex example
exp-addEntityType-vx text html latex
exp-addFilterRule-rn text html latex
exp-calcAngleDist-31 text html latex
exp-calcCanberraDist text html latex
exp-calcCorrelationDist-45 text html latex
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** building package indices ...
* DONE (explorase)