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Package 227/251HostnameOS / ArchBUILDCHECKBUILD BIN
SNPchip 1.3.4
Robert Scharpf
Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/SNPchip
Last Changed Rev: 29014 / Revision: 29143
Last Changed Date: 2007-12-04 06:37:34 -0800 (Tue, 04 Dec 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK [ OK ]
lemming Windows Server 2003 (32-bit) / x64  OK  OK  OK 
Package: SNPchip
Version: 1.3.4
Command: E:\biocbld\bbs-2.2-bioc\R\bin\R.exe CMD INSTALL --build --library=SNPchip.buildbin-libdir SNPchip_1.3.4.tar.gz
StartedAt: 2007-12-11 06:46:19 -0700 (Tue, 11 Dec 2007)
EndedAt: 2007-12-11 06:46:43 -0700 (Tue, 11 Dec 2007)
EllapsedTime: 23.9 seconds
RetCode: 0
Status: OK
PackageFile: SNPchip_1.3.4.zip
PackageFileSize: 1.922 MiB

Command output

installing R.css in E:/biocbld/bbs-2.2-bioc/meat/SNPchip.buildbin-libdir

Using auto-selected zip options 'SNPchip-ZIPDATA=zip SNPchip-HELP=ziponly'

---------- Making package SNPchip ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  preparing package SNPchip for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: oligoClasses
Creating a new generic function for "summary" in "SNPchip"
  installing man source files
  installing indices
  zipping data
  installing help
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 >>> Building/Updating help pages for package 'SNPchip'
     Formats: text html latex example chm 
  DEPRECATED-classes                text    html    latex           chm
  ParESet-class                     text    html    latex   example chm
  ParSnpCallSet-class               text    html    latex   example chm
  ParSnpCopyNumberSet-class         text    html    latex   example chm
  ParSnpSet-class                   text    html    latex   example chm
  addFeatureData-method             text    html    latex           chm
  allPlots-methods                  text    html    latex           chm
  alleleA                           text    html    latex           chm
  alleleB                           text    html    latex           chm
  calculateCopyNumber               text    html    latex           chm
  centromere                        text    html    latex   example chm
  chromosome                        text    html    latex           chm
  chromosomeAnnotation              text    html    latex   example chm
  chromosomeSize                    text    html    latex   example chm
  coerce-methods                    text    html    latex           chm
  cytoband                          text    html    latex   example chm
  dbSnpId                           text    html    latex   example chm
  enzyme                            text    html    latex           chm
  fragmentLength                    text    html    latex           chm
  getPar-methods                    text    html    latex           chm
  getSnpAnnotation                  text    html    latex   example chm
  hapmap                            text    html    latex   example chm
  initialize-methods                text    html    latex           chm
  plotCytoband                      text    html    latex   example chm
  plotSnp                           text    html    latex   example chm
  position                          text    html    latex           chm
  sample.snpset                     text    html    latex   example chm
  selectSomeIndex                   text    html    latex           chm
  show-methods                      text    html    latex           chm
  showSummary                       text    html    latex           chm
  smoothSnp                         text    html    latex           chm
  snpPar                            text    html    latex   example chm
  summary-methods                   text    html    latex           chm
  unsplitSnpSet                     text    html    latex   example chm
  updateObject-methods              text    html    latex           chm
  zipping help files
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.2-bioc\meat\R.INSTALL.5980\SNPchip\chm\SNPchip.chm





Compile time: 0 minutes, 1 second

36	Topics

139	Local links

1	Internet link

1	Graphic





Created e:\biocbld\bbs-2.2-bioc\meat\R.INSTALL.5980\SNPchip\chm\SNPchip.chm, 36,842 bytes

Compression decreased file by 56,091 bytes.

  adding MD5 sums

packaged installation of package 'SNPchip' as SNPchip_1.3.4.zip
* DONE (SNPchip)