GeneRfold 0.1.3
Antoine Lucas
| Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GeneRfold | | Last Changed Rev: 28108 / Revision: 29143 | | Last Changed Date: 2007-10-21 09:10:13 -0700 (Sun, 21 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | ERROR | skipped | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | [ ERROR ] | skipped | |
| wellington | Linux (openSUSE 10.3) / i686 | ERROR | skipped | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | ERROR | skipped | skipped |
| lemming | Windows Server 2003 (32-bit) / x64 | ERROR | skipped | skipped |
* checking for file 'GeneRfold/DESCRIPTION' ... OK
* preparing 'GeneRfold':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running cleanup
* checking whether 'INDEX' is up-to-date ... OK
* installing the package to re-build vignettes
/tmp/Rinst630034484
* Installing *source* package 'GeneRfold' ...
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for main in -lRNA... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-2.2-bioc/R/include -I/home/biocbuild/bbs-2.2-bioc/R/include -I/usr/local/include/ -fPIC -Wno-conversion -I/usr/local/include -fpic -g -O2 -Wall -c viennaR.c -o viennaR.o
gcc -std=gnu99 -shared -L/usr/local/lib64 -o GeneRfold.so viennaR.o -L/usr/local/lib/ -lRNA -fPIC -L/home/biocbuild/bbs-2.2-bioc/R/lib -lR
** R
** inst
** help
>>> Building/Updating help pages for package 'GeneRfold'
Formats: text html latex example
fold text html latex example
rnaplot text html latex example
** building package indices ...
* DONE (GeneRfold)
* creating vignettes ... ERROR
Loading required package: GeneR
Error: processing vignette 'GeneRfold.Rnw' failed with diagnostics:
chunk 1
Error : package 'GeneR' could not be loaded
In addition: Warning message:
In library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc = lib.loc) :
there is no package called 'GeneR'
Execution halted