EBarrays 2.3.0
Ming Yuan
| Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/EBarrays | | Last Changed Rev: 28098 / Revision: 29143 | | Last Changed Date: 2007-10-21 09:03:02 -0700 (Sun, 21 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | [ OK ] | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| lemming | Windows Server 2003 (32-bit) / x64 | OK | OK | OK |
* checking for working latex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.2-bioc/meat/EBarrays.Rcheck'
* using R version 2.7.0 Under development (unstable) (2007-12-06 r43609)
* checking for file 'EBarrays/DESCRIPTION' ... OK
* this is package 'EBarrays' version '2.3.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'EBarrays' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating EBarrays-Ex.R ... OK
* checking examples ... OK
* checking tests ...
make[1]: Entering directory `/loc/home/biocbuild/bbs-2.2-bioc/meat/EBarrays.Rcheck/tests'
Running 'test.R'
make[1]: Leaving directory `/loc/home/biocbuild/bbs-2.2-bioc/meat/EBarrays.Rcheck/tests'
OK
* checking package vignettes in 'inst/doc' ... NOTE
--- running texi2dvi on vignettes
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './vignette.tex' ...
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './vignette.tex' ...
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './vignette.tex' ...
* creating EBarrays-manual.tex ... OK
* checking EBarrays-manual.tex ... OK
/loc/home/biocbuild/bbs-2.2-bioc/meat/EBarrays.Rcheck
* Installing *source* package 'EBarrays' ...
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-2.2-bioc/R/include -I/home/biocbuild/bbs-2.2-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c ebarrays.c -o ebarrays.o
gcc -std=gnu99 -shared -L/usr/local/lib64 -o EBarrays.so ebarrays.o -L/home/biocbuild/bbs-2.2-bioc/R/lib -lR
** R
** data
** demo
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: lattice
Loading required package: cluster
** help
Note: ignoring empty \keyword entries
Note: removing empty section \examples
Note: unmatched right brace in 'postprob' on or after line 66
>>> Building/Updating help pages for package 'EBarrays'
Formats: text html latex example
EBarrays-Internal text html latex
crit.fun text html latex example
ebarraysFamily-class text html latex example
ebplots text html latex
emfit text html latex example
gould text html latex example
postprob text html latex example
utilities text html latex example
** building package indices ...
* DONE (EBarrays)