BioC experimental data: CHECK report for frmaExampleData on zin2

Package: frmaExampleData

Version: 1.0.0

Command: /home/biocbuild/bbs-2.14-bioc/R/bin/R CMD check --no-vignettes --timings frmaExampleData_1.0.0.tar.gz

StartedAt: 2014-10-04 09:14:46 -0700 (Sat, 04 Oct 2014)

EndedAt: 2014-10-04 09:17:11 -0700 (Sat, 04 Oct 2014)

EllapsedTime: 145.1 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: frmaExampleData.Rcheck

Warnings: 1

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### Running command:
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###   /home/biocbuild/bbs-2.14-bioc/R/bin/R CMD check --no-vignettes --timings frmaExampleData_1.0.0.tar.gz
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* using log directory ‘/home/biocbuild/bbs-2.14-data-experiment/meat/frmaExampleData.Rcheck’
* using R version 3.1.1 (2014-07-10)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘frmaExampleData/DESCRIPTION’ ... OK
* this is package ‘frmaExampleData’ version ‘1.0.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘frmaExampleData’ can be installed ... [1s/1s] OK
* checking installed package size ... NOTE
  installed size is 22.8Mb
  sub-directories of 1Mb or more:
    data  22.7Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
                        old_size new_size compress
  AffyBatch133a.rda       10.8Mb    6.9Mb       xz
  AffyBatch133atag.rda     2.2Mb    891Kb       xz
  AffyBatch133plus2.rda    5.4Mb    1.8Mb       xz
  AffyBatchExample.rda     4.3Mb    2.3Mb       xz
* checking examples ... [4s/4s] OK
* checking PDF version of manual ... OK

WARNING: There was 1 warning.
NOTE: There was 1 note.
See
  ‘/home/biocbuild/bbs-2.14-data-experiment/meat/frmaExampleData.Rcheck/00check.log’
for details.

* installing *source* package ‘frmaExampleData’ ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (frmaExampleData)

name	user	system	elapsed
AffyBatch133a	0.924	0.008	0.938
AffyBatch133atag	0.260	0.004	0.264
AffyBatch133plus2	2.304	0.020	2.353
AffyBatchExample	0.268	0.004	0.275