BioC experimental data: CHECK report for EatonEtAlChIPseq on moscato2

Package: EatonEtAlChIPseq

Version: 0.2.0

Command: rm -rf EatonEtAlChIPseq.buildbin-libdir && mkdir EatonEtAlChIPseq.buildbin-libdir && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=EatonEtAlChIPseq.buildbin-libdir EatonEtAlChIPseq_0.2.0.tar.gz >EatonEtAlChIPseq-install.out 2>&1 && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD check --library=EatonEtAlChIPseq.buildbin-libdir --install="check:EatonEtAlChIPseq-install.out" --force-multiarch --no-vignettes --timings EatonEtAlChIPseq_0.2.0.tar.gz

StartedAt: 2014-10-04 09:49:38 -0700 (Sat, 04 Oct 2014)

EndedAt: 2014-10-04 09:55:12 -0700 (Sat, 04 Oct 2014)

EllapsedTime: 333.6 seconds

RetCode: 0

Status:  OK

CheckDir: EatonEtAlChIPseq.Rcheck

Warnings: 0

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### Running command:
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###   rm -rf EatonEtAlChIPseq.buildbin-libdir && mkdir EatonEtAlChIPseq.buildbin-libdir && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=EatonEtAlChIPseq.buildbin-libdir EatonEtAlChIPseq_0.2.0.tar.gz >EatonEtAlChIPseq-install.out 2>&1 && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD check --library=EatonEtAlChIPseq.buildbin-libdir --install="check:EatonEtAlChIPseq-install.out" --force-multiarch --no-vignettes --timings EatonEtAlChIPseq_0.2.0.tar.gz
###
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* using log directory 'E:/biocbld/bbs-2.14-data-experiment/meat/EatonEtAlChIPseq.Rcheck'
* using R version 3.1.1 (2014-07-10)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'EatonEtAlChIPseq/DESCRIPTION' ... OK
* this is package 'EatonEtAlChIPseq' version '0.2.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'EatonEtAlChIPseq' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 20.6Mb
  sub-directories of 1Mb or more:
    extdata  20.5Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Non-standard license specification:
  Artistic 2.0
Standardizable: TRUE
Standardized license specification:
  Artistic-2.0
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ...
** running examples for arch 'i386' ... [34s] OK
Examples with CPU or elapsed time > 5s
           user system elapsed
orcAligns 22.81   0.59    23.4
** running examples for arch 'x64' ... [37s] OK
Examples with CPU or elapsed time > 5s
           user system elapsed
orcAligns 23.52   0.78   24.33
* checking PDF version of manual ... OK

NOTE: There were 2 notes.
See
  'E:/biocbld/bbs-2.14-data-experiment/meat/EatonEtAlChIPseq.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'EatonEtAlChIPseq' ...
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

install for x64

* installing *source* package 'EatonEtAlChIPseq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'EatonEtAlChIPseq' as EatonEtAlChIPseq_0.2.0.zip
* DONE (EatonEtAlChIPseq)

name	user	system	elapsed
orcAligns	22.81	0.59	23.40
orcPeaks	0.22	0.02	0.24

name	user	system	elapsed
orcAligns	23.52	0.78	24.33
orcPeaks	0.23	0.03	0.82