BioC experimental data: CHECK report for ARRmData on moscato2

Package: ARRmData

Version: 1.0.0

Command: rm -rf ARRmData.buildbin-libdir && mkdir ARRmData.buildbin-libdir && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=ARRmData.buildbin-libdir ARRmData_1.0.0.tar.gz >ARRmData-install.out 2>&1 && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD check --library=ARRmData.buildbin-libdir --install="check:ARRmData-install.out" --force-multiarch --no-vignettes --timings ARRmData_1.0.0.tar.gz

StartedAt: 2014-10-04 09:05:14 -0700 (Sat, 04 Oct 2014)

EndedAt: 2014-10-04 09:07:02 -0700 (Sat, 04 Oct 2014)

EllapsedTime: 108.1 seconds

RetCode: 0

Status:  OK

CheckDir: ARRmData.Rcheck

Warnings: 0

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### Running command:
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###   rm -rf ARRmData.buildbin-libdir && mkdir ARRmData.buildbin-libdir && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=ARRmData.buildbin-libdir ARRmData_1.0.0.tar.gz >ARRmData-install.out 2>&1 && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD check --library=ARRmData.buildbin-libdir --install="check:ARRmData-install.out" --force-multiarch --no-vignettes --timings ARRmData_1.0.0.tar.gz
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* using log directory 'E:/biocbld/bbs-2.14-data-experiment/meat/ARRmData.Rcheck'
* using R version 3.1.1 (2014-07-10)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'ARRmData/DESCRIPTION' ... OK
* this is package 'ARRmData' version '1.0.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'ARRmData' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 56.5Mb
  sub-directories of 1Mb or more:
    data  56.5Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: 'ARRmNormalization'
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ...
** running examples for arch 'i386' ... [7s] OK
Examples with CPU or elapsed time > 5s
           user system elapsed
betaMatrix 6.53   0.09    6.63
** running examples for arch 'x64' ... [15s] OK
Examples with CPU or elapsed time > 5s
                   user system elapsed
betaMatrix         5.68   0.14    5.82
greenControlMatrix 0.02   0.00    8.94
* checking PDF version of manual ... OK

NOTE: There were 2 notes.
See
  'E:/biocbld/bbs-2.14-data-experiment/meat/ARRmData.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'ARRmData' ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

install for x64

* installing *source* package 'ARRmData' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ARRmData' as ARRmData_1.0.0.zip
* DONE (ARRmData)

name	user	system	elapsed
betaMatrix	6.53	0.09	6.63
greenControlMatrix	0.02	0.00	0.02
redControlMatrix	0.00	0.00	0.01
sampleNames	0	0	0

name	user	system	elapsed
betaMatrix	5.68	0.14	5.82
greenControlMatrix	0.02	0.00	8.94
redControlMatrix	0.01	0.00	0.01
sampleNames	0	0	0