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BioC 2.14: INSTALL report for ggbio on moscato2

This page was generated on 2014-10-08 08:54:20 -0700 (Wed, 08 Oct 2014).

Package 347/824HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ggbio 1.12.10
Tengfei Yin
Snapshot Date: 2014-10-07 17:20:37 -0700 (Tue, 07 Oct 2014)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_14/madman/Rpacks/ggbio
Last Changed Rev: 93626 / Revision: 95116
Last Changed Date: 2014-08-26 15:16:30 -0700 (Tue, 26 Aug 2014)
zin2 Linux (Ubuntu 12.04.4 LTS) / x86_64  OK  OK  WARNINGS 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 [ OK ] OK  WARNINGS  OK 
petty Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  WARNINGS  OK 
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  WARNINGS  OK 

Summary

Package: ggbio
Version: 1.12.10
Command: C:\cygwin\bin\curl.exe -O http://zin2/BBS/2.14/bioc/src/contrib/ggbio_1.12.10.tar.gz && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch ggbio_1.12.10.tar.gz && rm ggbio_1.12.10.tar.gz
StartedAt: 2014-10-07 18:55:51 -0700 (Tue, 07 Oct 2014)
EndedAt: 2014-10-07 18:56:37 -0700 (Tue, 07 Oct 2014)
EllapsedTime: 46.2 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://zin2/BBS/2.14/bioc/src/contrib/ggbio_1.12.10.tar.gz && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch ggbio_1.12.10.tar.gz && rm ggbio_1.12.10.tar.gz
###
##############################################################################
##############################################################################




install for i386

* installing to library 'E:/biocbld/bbs-2.14-bioc/R/library'
* installing *source* package 'ggbio' ...
** R
** inst
** preparing package for lazy loading
Creating a new generic function for 'rescale' in package 'ggbio'
Creating a new generic function for 'xlim' in package 'ggbio'
Creating a generic function for 'print' from package 'base' in package 'ggbio'
Warning: 'eval' is deprecated.
Use 'plotIdeogram' instead.
See help("Deprecated")
Creating a generic function for 'summary' from package 'base' in package 'ggbio'
in method for 'geom_alignment' with signature '"OrganismDb"': no definition for class "OrganismDb"
Creating a new generic function for 'geom_rect' in package 'ggbio'
Creating a new generic function for 'geom_segment' in package 'ggbio'
Creating a new generic function for 'geom_bar' in package 'ggbio'
Creating a new generic function for 'stat_identity' in package 'ggbio'
Creating a new generic function for 'stat_bin' in package 'ggbio'
in method for 'autoplot' with signature '"OrganismDb"': no definition for class "OrganismDb"
Creating a generic function for 'aggregate' from package 'stats' in package 'ggbio'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing to library 'E:/biocbld/bbs-2.14-bioc/R/library'
* installing *source* package 'ggbio' ...
** testing if installed package can be loaded
* DONE (ggbio)