MinimumDistance 1.8.1 Robert B Scharpf
Snapshot Date: 2014-10-07 17:20:37 -0700 (Tue, 07 Oct 2014) | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_14/madman/Rpacks/MinimumDistance | Last Changed Rev: 94681 / Revision: 95116 | Last Changed Date: 2014-09-29 18:28:20 -0700 (Mon, 29 Sep 2014) |
| zin2 | Linux (Ubuntu 12.04.4 LTS) / x86_64 | NotNeeded | OK | OK | |
moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | OK | [ OK ] |
petty | Mac OS X Snow Leopard (10.6.8) / x86_64 | NotNeeded | OK | OK | OK |
morelia | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | OK | OK | OK |
##############################################################################
##############################################################################
###
### Running command:
###
### cd MinimumDistance.buildbin-libdir/MinimumDistance && zip -r ../../MinimumDistance_1.8.1.zip . & cd ../..
###
##############################################################################
##############################################################################
adding: data/ (256 bytes security) (stored 0%)
adding: data/lrr.segs.rda (188 bytes security) (stored 0%)
adding: data/map.segs.rda (188 bytes security) (stored 0%)
adding: data/md.segs.rda (188 bytes security) (stored 0%)
adding: data/trioSetListExample.rda (188 bytes security) (deflated 0%)
adding: DESCRIPTION (188 bytes security) (deflated 42%)
adding: doc/ (256 bytes security) (stored 0%)
adding: doc/index.html (188 bytes security) (deflated 58%)
adding: doc/MinimumDistance.pdf (188 bytes security) (deflated 6%)
adding: doc/MinimumDistance.R (188 bytes security) (deflated 73%)
adding: doc/MinimumDistance.Rnw (188 bytes security) (deflated 65%)
adding: extdata/ (256 bytes security) (stored 0%)
adding: extdata/baf.rda (188 bytes security) (stored 0%)
adding: extdata/exampleFiles.R (188 bytes security) (deflated 62%)
adding: extdata/F.txt (188 bytes security) (deflated 61%)
adding: extdata/logRratio.rda (188 bytes security) (stored 0%)
adding: extdata/M.txt (188 bytes security) (deflated 61%)
adding: extdata/O.txt (188 bytes security) (deflated 62%)
adding: extdata/O1.txt (188 bytes security) (deflated 62%)
adding: extdata/pedigreeInfo.rda (188 bytes security) (stored 0%)
adding: extdata/pennCNV_MendelianProb.rda (188 bytes security) (deflated 2%)
adding: extdata/sample.sheet.rda (188 bytes security) (stored 0%)
adding: extdata/trioSet12023chr12.rda (188 bytes security) (stored 0%)
adding: help/ (256 bytes security) (stored 0%)
adding: help/aliases.rds (188 bytes security) (stored 0%)
adding: help/AnIndex (188 bytes security) (deflated 83%)
adding: help/MinimumDistance.rdb (188 bytes security) (deflated 1%)
adding: help/MinimumDistance.rdx (188 bytes security) (stored 0%)
adding: help/paths.rds (188 bytes security) (stored 0%)
adding: html/ (256 bytes security) (stored 0%)
adding: html/00Index.html (188 bytes security) (deflated 87%)
adding: html/R.css (188 bytes security) (deflated 70%)
adding: INDEX (188 bytes security) (deflated 64%)
adding: MD5 (188 bytes security) (deflated 46%)
adding: Meta/ (256 bytes security) (stored 0%)
adding: Meta/data.rds (188 bytes security) (stored 0%)
adding: Meta/hsearch.rds (188 bytes security) (stored 0%)
adding: Meta/links.rds (188 bytes security) (stored 0%)
adding: Meta/nsInfo.rds (188 bytes security) (stored 0%)
adding: Meta/package.rds (188 bytes security) (stored 0%)
adding: Meta/Rd.rds (188 bytes security) (stored 0%)
adding: Meta/vignette.rds (188 bytes security) (stored 0%)
adding: NAMESPACE (188 bytes security) (deflated 65%)
adding: NEWS.Rd (188 bytes security) (deflated 18%)
adding: R/ (256 bytes security) (stored 0%)
adding: R/MinimumDistance (188 bytes security) (deflated 41%)
adding: R/MinimumDistance.rdb (188 bytes security) (deflated 22%)
adding: R/MinimumDistance.rdx (188 bytes security) (deflated 3%)
adding: scripts/ (256 bytes security) (stored 0%)
adding: scripts/affy.R (188 bytes security) (deflated 66%)
adding: scripts/Affy2.R (188 bytes security) (deflated 64%)
adding: scripts/cleft_notParallel.Rnw (188 bytes security) (deflated 66%)
adding: scripts/Discordance.Rnw (188 bytes security) (deflated 11%)
adding: scripts/logR.baf.rda (188 bytes security) (deflated 2%)
adding: scripts/runDiscordance.R (188 bytes security) (deflated 36%)
adding: scripts/Sweave.sty (188 bytes security) (deflated 57%)
adding: unitTests/ (256 bytes security) (stored 0%)
adding: unitTests/Makefile (188 bytes security) (deflated 66%)
adding: unitTests/report.html (188 bytes security) (deflated 78%)
adding: unitTests/report.txt (188 bytes security) (deflated 73%)
adding: unitTests/reportSummary.txt (188 bytes security) (deflated 42%)
adding: unitTests/test_calculateMindist.R (188 bytes security) (deflated 45%)
adding: unitTests/test_Pedigree-class.R (188 bytes security) (deflated 71%)
adding: unitTests/test_posteriorCalls.R (188 bytes security) (deflated 60%)
adding: unitTests/test_splitsForCBS.R (188 bytes security) (deflated 47%)
adding: unitTests/test_TrioSetList.R (188 bytes security) (deflated 72%)