BioC experimental data: CHECK report for yeastRNASeq on moscato1

Package: yeastRNASeq

Version: 0.0.10

Command: rm -rf yeastRNASeq.buildbin-libdir && mkdir yeastRNASeq.buildbin-libdir && D:\biocbld\bbs-2.13-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=yeastRNASeq.buildbin-libdir yeastRNASeq_0.0.10.tar.gz >yeastRNASeq-install.out 2>&1 && D:\biocbld\bbs-2.13-bioc\R\bin\R.exe CMD check --library=yeastRNASeq.buildbin-libdir --install="check:yeastRNASeq-install.out" --force-multiarch --no-vignettes --timings yeastRNASeq_0.0.10.tar.gz && mv yeastRNASeq.buildbin-libdir/* yeastRNASeq.Rcheck/ && rmdir yeastRNASeq.buildbin-libdir

StartedAt: 2014-04-04 12:47:32 -0700 (Fri, 04 Apr 2014)

EndedAt: 2014-04-04 12:57:21 -0700 (Fri, 04 Apr 2014)

EllapsedTime: 589.4 seconds

RetCode: 0

Status: WARNINGS

CheckDir: yeastRNASeq.Rcheck

Warnings: 1

* using log directory 'D:/biocbld/bbs-2.13-data-experiment/meat/yeastRNASeq.Rcheck'
* using R version 3.0.3 (2014-03-06)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'yeastRNASeq/DESCRIPTION' ... OK
* this is package 'yeastRNASeq' version '0.0.10'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'yeastRNASeq' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 313.7Mb
  sub-directories of 1Mb or more:
    data    62.7Mb
    reads  250.8Mb
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
                    old_size new_size compress
  geneLevelData.rda     68Kb     43Kb    bzip2
  yeastAligned.rda    62.6Mb   44.4Mb       xz
  yeastAnno.rda         80Kb     57Kb       xz
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK

WARNING: There was 1 warning.
NOTE: There was 1 note.
See
  'D:/biocbld/bbs-2.13-data-experiment/meat/yeastRNASeq.Rcheck/00check.log'
for details.

BioC experimental data: CHECK report for yeastRNASeq on moscato1

Summary

Command output