BioC experimental data: CHECK report for DvDdata on moscato1

Package: DvDdata

Version: 0.99.3

Command: rm -rf DvDdata.buildbin-libdir && mkdir DvDdata.buildbin-libdir && D:\biocbld\bbs-2.13-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=DvDdata.buildbin-libdir DvDdata_0.99.3.tar.gz >DvDdata-install.out 2>&1 && D:\biocbld\bbs-2.13-bioc\R\bin\R.exe CMD check --library=DvDdata.buildbin-libdir --install="check:DvDdata-install.out" --force-multiarch --no-vignettes --timings DvDdata_0.99.3.tar.gz && mv DvDdata.buildbin-libdir/* DvDdata.Rcheck/ && rmdir DvDdata.buildbin-libdir

StartedAt: 2014-04-04 11:30:05 -0700 (Fri, 04 Apr 2014)

EndedAt: 2014-04-04 11:31:59 -0700 (Fri, 04 Apr 2014)

EllapsedTime: 114.2 seconds

RetCode: 0

Status:  OK

CheckDir: DvDdata.Rcheck

Warnings: 0

* using log directory 'D:/biocbld/bbs-2.13-data-experiment/meat/DvDdata.Rcheck'
* using R version 3.0.3 (2014-03-06)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'DvDdata/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'DvDdata' version '0.99.3'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'DvDdata' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 44.1Mb
  sub-directories of 1Mb or more:
    data  43.9Mb
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... NOTE
prepare_Rd: DvDdata-package.Rd:35-37: Dropping empty section \seealso
prepare_Rd: GEOfactorvalues.Rd:18-20: Dropping empty section \references
prepare_Rd: annotationlist.Rd:17-18: Dropping empty section \source
prepare_Rd: druglabels.Rd:11-13: Dropping empty section \details
prepare_Rd: genelist.Rd:14-16: Dropping empty section \source
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... [0s] OK
** running examples for arch 'x64' ... [1s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK

NOTE: There were 2 notes.
See
  'D:/biocbld/bbs-2.13-data-experiment/meat/DvDdata.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'DvDdata' ...
** data
*** moving datasets to lazyload DB
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'DvDdata' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DvDdata' as DvDdata_0.99.3.zip
* DONE (DvDdata)

name	user	system	elapsed
DvDdata-package	0.02	0.02	0.03
GEOfactorvalues	0	0	0
annotationlist	0.00	0.01	0.02
cytodisease	0	0	0
cytodrug	0	0	0
diseaseClusters	0.02	0.00	0.01
diseaseRL	0	0	0
diseaselabels	0.01	0.00	0.02
drugClusters	0	0	0
drugRL	0	0	0
druglabels	0	0	0
genelist	0	0	0

name	user	system	elapsed
DvDdata-package	0.02	0.00	0.01
GEOfactorvalues	0	0	0
annotationlist	0	0	0
cytodisease	0	0	0
cytodrug	0.01	0.00	0.02
diseaseClusters	0	0	0
diseaseRL	0.02	0.00	0.01
diseaselabels	0	0	0
drugClusters	0.01	0.00	0.02
drugRL	0	0	0
druglabels	0.02	0.00	0.01
genelist	0	0	0