phyloseq 1.6.1
Paul J. McMurdie
| Snapshot Date: 2014-04-04 16:20:29 -0700 (Fri, 04 Apr 2014) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_13/madman/Rpacks/phyloseq | | Last Changed Rev: 86242 / Revision: 88450 | | Last Changed Date: 2014-02-08 19:52:46 -0800 (Sat, 08 Feb 2014) |
| zin1 | Linux (Ubuntu 12.04.4 LTS) / x86_64 | OK | OK | |
| moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | [ OK ] |
| perceval | Mac OS X Snow Leopard (10.6.8) / x86_64 | OK | OK | OK |
adding: CITATION (188 bytes security) (deflated 47%)
adding: data/ (256 bytes security) (stored 0%)
adding: data/datalist (188 bytes security) (stored 0%)
adding: data/enterotype.RData (188 bytes security) (deflated 0%)
adding: data/esophagus.RData (188 bytes security) (stored 0%)
adding: data/GlobalPatterns.RData (188 bytes security) (deflated 0%)
adding: data/soilrep.RData (188 bytes security) (deflated 0%)
adding: DESCRIPTION (188 bytes security) (deflated 49%)
adding: doc/ (256 bytes security) (stored 0%)
adding: doc/index.html (188 bytes security) (deflated 46%)
adding: doc/Unweighted_UniFrac.RData (188 bytes security) (stored 0%)
adding: extdata/ (256 bytes security) (stored 0%)
adding: extdata/biom-refseq.fasta (188 bytes security) (deflated 71%)
adding: extdata/biom-tree.phy (188 bytes security) (deflated 37%)
adding: extdata/esophagus.fn.list.gz (188 bytes security) (deflated 0%)
adding: extdata/esophagus.good.groups.gz (188 bytes security) (stored 0%)
adding: extdata/esophagus.tree.gz (188 bytes security) (stored 0%)
adding: extdata/gg13-5-73.tree.gz (188 bytes security) (stored 0%)
adding: extdata/GP_otu_table_rand_short.txt.gz (188 bytes security) (stored 0%)
adding: extdata/GP_tree_rand_short.newick.gz (188 bytes security) (stored 0%)
adding: extdata/master_map.txt (188 bytes security) (deflated 61%)
adding: extdata/min_dense_otu_table.biom (188 bytes security) (deflated 70%)
adding: extdata/min_sparse_otu_table.biom (188 bytes security) (deflated 73%)
adding: extdata/qiime500-refseq.fasta (188 bytes security) (deflated 82%)
adding: extdata/rformat_dist_0.03.txt.gz (188 bytes security) (deflated 45%)
adding: extdata/rich_dense_otu_table.biom (188 bytes security) (deflated 79%)
adding: extdata/rich_sparse_otu_table.biom (188 bytes security) (deflated 79%)
adding: extdata/study_816_split_library_seqs_and_mapping.tar.gz (188 bytes security) (stored 0%)
adding: extdata/study_816_split_library_seqs_and_mapping.zip (188 bytes security) (stored 0%)
adding: extdata/study_gp.txt (188 bytes security) (deflated 61%)
adding: help/ (256 bytes security) (stored 0%)
adding: help/aliases.rds (188 bytes security) (stored 0%)
adding: help/AnIndex (188 bytes security) (deflated 82%)
adding: help/paths.rds (188 bytes security) (stored 0%)
adding: help/phyloseq.rdb (188 bytes security) (deflated 2%)
adding: help/phyloseq.rdx (188 bytes security) (stored 0%)
adding: html/ (256 bytes security) (stored 0%)
adding: html/00Index.html (188 bytes security) (deflated 84%)
adding: html/R.css (188 bytes security) (deflated 70%)
adding: INDEX (188 bytes security) (deflated 69%)
adding: MD5 (188 bytes security) (deflated 46%)
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adding: Meta/package.rds (188 bytes security) (stored 0%)
adding: Meta/Rd.rds (188 bytes security) (stored 0%)
adding: NAMESPACE (188 bytes security) (deflated 76%)
adding: NEWS (188 bytes security) (deflated 64%)
adding: R/ (256 bytes security) (stored 0%)
adding: R/phyloseq (188 bytes security) (deflated 41%)
adding: R/phyloseq.rdb (188 bytes security) (deflated 25%)
adding: R/phyloseq.rdx (188 bytes security) (deflated 0%)
adding: scripts/ (256 bytes security) (stored 0%)
adding: scripts/installer.R (188 bytes security) (deflated 39%)
adding: tests/ (256 bytes security) (stored 0%)
adding: tests/Rplots.pdf (188 bytes security) (deflated 5%)
adding: tests/test-IO.R (188 bytes security) (deflated 75%)
adding: tests/test-merge.R (188 bytes security) (deflated 72%)
adding: tests/test-phyloseq.R (188 bytes security) (deflated 77%)
adding: tests/test-plot.R (188 bytes security) (deflated 78%)
adding: tests/test-rarefy.R (188 bytes security) (deflated 71%)
adding: tests/test-subset.R (188 bytes security) (deflated 71%)
adding: tests/test-transform.R (188 bytes security) (deflated 73%)