BioC experimental data: CHECK report for pcaGoPromoter.Mm.mm9 on moscato2

Package: pcaGoPromoter.Mm.mm9

Version: 0.99.4

Command: rm -rf pcaGoPromoter.Mm.mm9.buildbin-libdir && mkdir pcaGoPromoter.Mm.mm9.buildbin-libdir && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=pcaGoPromoter.Mm.mm9.buildbin-libdir pcaGoPromoter.Mm.mm9_0.99.4.tar.gz >pcaGoPromoter.Mm.mm9-install.out 2>&1 && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD check --library=pcaGoPromoter.Mm.mm9.buildbin-libdir --install="check:pcaGoPromoter.Mm.mm9-install.out" --force-multiarch --no-vignettes --timings pcaGoPromoter.Mm.mm9_0.99.4.tar.gz && mv pcaGoPromoter.Mm.mm9.buildbin-libdir/* pcaGoPromoter.Mm.mm9.Rcheck/ && rmdir pcaGoPromoter.Mm.mm9.buildbin-libdir

StartedAt: 2013-10-08 13:45:03 -0700 (Tue, 08 Oct 2013)

EndedAt: 2013-10-08 13:49:45 -0700 (Tue, 08 Oct 2013)

EllapsedTime: 281.3 seconds

RetCode: 0

Status: OK

CheckDir: pcaGoPromoter.Mm.mm9.Rcheck

Warnings: 0

Command output

* using log directory 'E:/biocbld/bbs-2.12-data-experiment/meat/pcaGoPromoter.Mm.mm9.Rcheck'
* using R version 3.0.1 (2013-05-16)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'pcaGoPromoter.Mm.mm9/DESCRIPTION' ... OK
* this is package 'pcaGoPromoter.Mm.mm9' version '0.99.4'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'pcaGoPromoter.Mm.mm9' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 66.7Mb
  sub-directories of 1Mb or more:
    data  66.6Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... NONE
* checking PDF version of manual ... OK

NOTE: There was 1 note.
See
  'E:/biocbld/bbs-2.12-data-experiment/meat/pcaGoPromoter.Mm.mm9.Rcheck/00check.log'
for details.


install for i386

* installing *source* package 'pcaGoPromoter.Mm.mm9' ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

install for x64

* installing *source* package 'pcaGoPromoter.Mm.mm9' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'pcaGoPromoter.Mm.mm9' as pcaGoPromoter.Mm.mm9_0.99.4.zip
* DONE (pcaGoPromoter.Mm.mm9)

BioC experimental data: CHECK report for pcaGoPromoter.Mm.mm9 on moscato2

Summary

Command output