SpikeInSubset 1.2.13
Rafael A. Irizarry
| Snapshot Date: 2013-10-08 10:15:19 -0700 (Tue, 08 Oct 2013) | | URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/SpikeInSubset | | Last Changed Rev: 2317 / Revision: 2510 | | Last Changed Date: 2013-04-03 15:11:40 -0700 (Wed, 03 Apr 2013) |
| george2 | Linux (Ubuntu 12.04.1 LTS) / x86_64 | OK | [ WARNINGS ] | |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | WARNINGS | OK |
| petty | Mac OS X Snow Leopard (10.6.8) / x86_64 | OK | WARNINGS | OK |
* using log directory ‘/home/biocbuild/bbs-2.12-data-experiment/meat/SpikeInSubset.Rcheck’
* using R version 3.0.1 (2013-05-16)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘SpikeInSubset/DESCRIPTION’ ... OK
* this is package ‘SpikeInSubset’ version ‘1.2.13’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘SpikeInSubset’ can be installed ... [4s/4s] WARNING
Found the following significant warnings:
Warning: /home/biocbuild/bbs-2.12-data-experiment/meat/SpikeInSubset.Rcheck/00_pkg_src/SpikeInSubset/man/xhyb.Rd: docType ‘instance’ is unrecognized
See ‘/home/biocbuild/bbs-2.12-data-experiment/meat/SpikeInSubset.Rcheck/00install.out’ for details.
* checking installed package size ... NOTE
installed size is 20.5Mb
sub-directories of 1Mb or more:
data 20.4Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... WARNING
prepare_Rd: xhyb.Rd: docType ‘instance’ is unrecognized
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
Note: significantly better compression could be obtained
by using R CMD build --resave-data
old_size new_size compress
hgu133a.spikein.xhyb.rda 12Kb 2Kb gzip
mas133.rda 2.2Mb 996Kb xz
mas95.rda 1.3Mb 574Kb xz
rma133.rda 2.2Mb 889Kb xz
rma95.rda 1.3Mb 522Kb xz
spikein133.rda 7.3Mb 4.4Mb xz
spikein95.rda 6.1Mb 3.6Mb xz
* checking examples ... NONE
* checking PDF version of manual ... OK
WARNING: There were 3 warnings.
NOTE: There was 1 note.
See
‘/home/biocbuild/bbs-2.12-data-experiment/meat/SpikeInSubset.Rcheck/00check.log’
for details.
* installing *source* package ‘SpikeInSubset’ ...
** R
** data
** preparing package for lazy loading
** help
Warning: /home/biocbuild/bbs-2.12-data-experiment/meat/SpikeInSubset.Rcheck/00_pkg_src/SpikeInSubset/man/xhyb.Rd: docType ‘instance’ is unrecognized
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (SpikeInSubset)