BioC experimental data: CHECK report for SomatiCAData on petty

Package: SomatiCAData

Version: 1.1.0

Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch SomatiCAData_1.1.0.tar.gz

StartedAt: 2013-10-08 14:28:53 -0700 (Tue, 08 Oct 2013)

EndedAt: 2013-10-08 14:32:44 -0700 (Tue, 08 Oct 2013)

EllapsedTime: 231.3 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: SomatiCAData.Rcheck

Warnings: 2

* using log directory '/Users/biocbuild/bbs-2.12-data-experiment/meat/SomatiCAData.Rcheck'
* using R version 3.0.1 (2013-05-16)
* using platform: x86_64-apple-darwin10.8.0 (64-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'SomatiCAData/DESCRIPTION' ... OK
* this is package 'SomatiCAData' version '1.1.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package 'SomatiCAData' can be installed ... [14s/15s] OK
* checking installed package size ... NOTE
  installed size is 32.2Mb
  sub-directories of 1Mb or more:
    data  32.1Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... WARNING
Subdirectory 'inst' contains no files.
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
           old_size new_size compress
  glio.rda   32.4Mb   18.9Mb       xz
* checking examples ... [1s/1s] OK
* checking PDF version of manual ... OK

WARNING: There were 2 warnings.
NOTE: There was 1 note.
See
  '/Users/biocbuild/bbs-2.12-data-experiment/meat/SomatiCAData.Rcheck/00check.log'
for details.

* installing *source* package 'SomatiCAData' ...
** R
** data
*** moving datasets to lazyload DB
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (SomatiCAData)

name	user	system	elapsed
SomatiCAData-package	0.029	0.002	0.031