BioC experimental data: CHECK report for NCIgraphData on moscato2

Package: NCIgraphData

Version: 0.99.6

Command: rm -rf NCIgraphData.buildbin-libdir && mkdir NCIgraphData.buildbin-libdir && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=NCIgraphData.buildbin-libdir NCIgraphData_0.99.6.tar.gz >NCIgraphData-install.out 2>&1 && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD check --library=NCIgraphData.buildbin-libdir --install="check:NCIgraphData-install.out" --force-multiarch --no-vignettes --timings NCIgraphData_0.99.6.tar.gz && mv NCIgraphData.buildbin-libdir/* NCIgraphData.Rcheck/ && rmdir NCIgraphData.buildbin-libdir

StartedAt: 2013-10-08 13:42:00 -0700 (Tue, 08 Oct 2013)

EndedAt: 2013-10-08 13:47:28 -0700 (Tue, 08 Oct 2013)

EllapsedTime: 327.3 seconds

RetCode: 0

Status: WARNINGS

CheckDir: NCIgraphData.Rcheck

Warnings: 1

* using log directory 'E:/biocbld/bbs-2.12-data-experiment/meat/NCIgraphData.Rcheck'
* using R version 3.0.1 (2013-05-16)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'NCIgraphData/DESCRIPTION' ... OK
* this is package 'NCIgraphData' version '0.99.6'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'NCIgraphData' can be installed ... OK
* checking installed package size ... NOTE
  installed size is  5.4Mb
  sub-directories of 1Mb or more:
    data   5.3Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
                        old_size new_size compress
  NCI-cyList.RData         4.3Mb    2.0Mb       xz
  reactome-cyList.RData    1.1Mb    558Kb       xz
* checking examples ...
** running examples for arch 'i386' ... [39s] OK
Examples with CPU or elapsed time > 5s
           user system elapsed
NCI.cyList 5.54   0.17   37.67
** running examples for arch 'x64' ... [64s] OK
Examples with CPU or elapsed time > 5s
           user system elapsed
NCI.cyList 6.13   0.09   62.92
* checking PDF version of manual ... OK

WARNING: There was 1 warning.
NOTE: There was 1 note.
See
  'E:/biocbld/bbs-2.12-data-experiment/meat/NCIgraphData.Rcheck/00check.log'
for details.

BioC experimental data: CHECK report for NCIgraphData on moscato2

Summary

Command output