lpNet 0.99.0
Bettina Knapp
| Snapshot Date: 2013-03-24 17:01:43 -0700 (Sun, 24 Mar 2013) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/lpNet | | Last Changed Rev: 74507 / Revision: 74774 | | Last Changed Date: 2013-03-18 08:37:30 -0700 (Mon, 18 Mar 2013) |
| george2 | Linux (Ubuntu 12.04.1 LTS) / x86_64 | OK | [ OK ] | |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | OK |
| petty | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* using log directory ‘/home/biocbuild/bbs-2.12-bioc/meat/lpNet.Rcheck’
* using R version 3.0.0 beta (2013-03-19 r62328)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘lpNet/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘lpNet’ version ‘0.99.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘lpNet’ can be installed ... [9s/10s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
prepare_Rd: CV.Rd:79-81: Dropping empty section \details
prepare_Rd: CV.Rd:93-95: Dropping empty section \note
prepare_Rd: CV.Rd:90-92: Dropping empty section \author
prepare_Rd: CV.Rd:87-89: Dropping empty section \references
prepare_Rd: CV.Rd:99-101: Dropping empty section \seealso
prepare_Rd: calcActivation.Rd:28-30: Dropping empty section \details
prepare_Rd: calcActivation.Rd:40-42: Dropping empty section \note
prepare_Rd: calcActivation.Rd:37-39: Dropping empty section \author
prepare_Rd: calcActivation.Rd:34-36: Dropping empty section \references
prepare_Rd: calcActivation.Rd:46-48: Dropping empty section \seealso
prepare_Rd: calcPrediction.Rd:59-61: Dropping empty section \details
prepare_Rd: calcPrediction.Rd:71-73: Dropping empty section \note
prepare_Rd: calcPrediction.Rd:68-70: Dropping empty section \author
prepare_Rd: calcPrediction.Rd:65-67: Dropping empty section \references
prepare_Rd: calcRangeLambda.Rd:25-27: Dropping empty section \details
prepare_Rd: calcRangeLambda.Rd:37-39: Dropping empty section \note
prepare_Rd: calcRangeLambda.Rd:34-36: Dropping empty section \author
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prepare_Rd: calcRangeLambda.Rd:43-45: Dropping empty section \seealso
prepare_Rd: doILP.Rd:53-55: Dropping empty section \details
prepare_Rd: doILP.Rd:65-67: Dropping empty section \note
prepare_Rd: doILP.Rd:62-64: Dropping empty section \author
prepare_Rd: doILP.Rd:59-61: Dropping empty section \references
prepare_Rd: doILP.Rd:71-73: Dropping empty section \seealso
prepare_Rd: getAdja.Rd:22-24: Dropping empty section \details
prepare_Rd: getAdja.Rd:34-36: Dropping empty section \note
prepare_Rd: getAdja.Rd:31-33: Dropping empty section \author
prepare_Rd: getAdja.Rd:28-30: Dropping empty section \references
prepare_Rd: getEdgeAnnot.Rd:22-24: Dropping empty section \details
prepare_Rd: getEdgeAnnot.Rd:34-36: Dropping empty section \note
prepare_Rd: getEdgeAnnot.Rd:31-33: Dropping empty section \author
prepare_Rd: getEdgeAnnot.Rd:28-30: Dropping empty section \references
prepare_Rd: getEdgeAnnot.Rd:40-42: Dropping empty section \seealso
prepare_Rd: getObsMat.Rd:31-33: Dropping empty section \details
prepare_Rd: getObsMat.Rd:43-45: Dropping empty section \note
prepare_Rd: getObsMat.Rd:40-42: Dropping empty section \author
prepare_Rd: getObsMat.Rd:37-39: Dropping empty section \references
prepare_Rd: getSampleAdja.Rd:37-39: Dropping empty section \details
prepare_Rd: getSampleAdja.Rd:49-51: Dropping empty section \note
prepare_Rd: getSampleAdja.Rd:46-48: Dropping empty section \author
prepare_Rd: getSampleAdja.Rd:43-45: Dropping empty section \references
prepare_Rd: lpNet-package.Rd:22-25: Dropping empty section \author
prepare_Rd: lpNet-package.Rd:34-37: Dropping empty section \seealso
prepare_Rd: lpNet-package.Rd:38-40: Dropping empty section \examples
prepare_Rd: summarizeRepl.Rd:22-24: Dropping empty section \details
prepare_Rd: summarizeRepl.Rd:34-36: Dropping empty section \note
prepare_Rd: summarizeRepl.Rd:31-33: Dropping empty section \author
prepare_Rd: summarizeRepl.Rd:28-30: Dropping empty section \references
prepare_Rd: summarizeRepl.Rd:40-41: Dropping empty section \seealso
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking examples ... [8s/9s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK
NOTE: There was 1 note.
See
‘/home/biocbuild/bbs-2.12-bioc/meat/lpNet.Rcheck/00check.log’
for details.