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Package 248/658HostnameOS / ArchBUILDCHECKBUILD BIN
genefilter 1.41.3
Bioconductor Package Maintainer
Snapshot Date: 2013-03-23 17:02:20 -0700 (Sat, 23 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/genefilter
Last Changed Rev: 74349 / Revision: 74756
Last Changed Date: 2013-03-14 14:17:56 -0700 (Thu, 14 Mar 2013)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  OK  WARNINGS 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
petty Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
pelham Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK [ OK ]

Summary

Package: genefilter
Version: 1.41.3
Command: rm -rf genefilter.buildbin-libdir && mkdir genefilter.buildbin-libdir && /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL --build --no-multiarch --library=genefilter.buildbin-libdir genefilter_1.41.3.tar.gz
StartedAt: 2013-03-24 11:41:04 -0700 (Sun, 24 Mar 2013)
EndedAt: 2013-03-24 11:41:21 -0700 (Sun, 24 Mar 2013)
EllapsedTime: 17.4 seconds
RetCode: 0
Status:  OK 
PackageFile: genefilter_1.41.3.tgz
PackageFileSize: 1.143 MiB

Command output

* installing *source* package 'genefilter' ...
** libs
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c half_range_mode.cpp -o half_range_mode.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c init.c -o init.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c nd.c -o nd.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c pAUC.c -o pAUC.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c rowPAUCs.c -o rowPAUCs.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c rowttests.c -o rowttests.o
gfortran-4.2 -arch x86_64   -fPIC  -g -O2 -Wall -pedantic  -c ttest.f -o ttest.o
llvm-g++-4.2 -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o genefilter.so half_range_mode.o init.o nd.o pAUC.o rowPAUCs.o rowttests.o ttest.o -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/x86_64 -L/usr/local/lib/x86_64 -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3 -lgfortran -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.12-bioc/meat/genefilter.buildbin-libdir/genefilter/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
Creating a generic function for 'plot' from package 'graphics' in package 'genefilter'
** help
*** installing help indices
** building package indices
** installing vignettes
   'howtogenefilter.Rnw' 
   'howtogenefinder.Rnw' 
   'independent_filtering.Rnw' 
   'independent_filtering_plots.Rnw' 
** testing if installed package can be loaded
packaged installation of 'genefilter' as 'genefilter_1.41.3.tgz'
* DONE (genefilter)