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Package 141/658HostnameOS / ArchBUILDCHECKBUILD BIN
CNVtools 1.53.0
Chris Barnes
Snapshot Date: 2013-03-23 17:02:20 -0700 (Sat, 23 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/CNVtools
Last Changed Rev: 70052 / Revision: 74756
Last Changed Date: 2012-10-01 15:43:56 -0700 (Mon, 01 Oct 2012)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  OK  WARNINGS 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
petty Mac OS X Leopard (10.5.8) / i386  OK  WARNINGS  OK 
pelham Mac OS X Snow Leopard (10.6.8) / x86_64  OK  WARNINGS [ OK ]

Summary

Package: CNVtools
Version: 1.53.0
Command: rm -rf CNVtools.buildbin-libdir && mkdir CNVtools.buildbin-libdir && /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL --build --no-multiarch --library=CNVtools.buildbin-libdir CNVtools_1.53.0.tar.gz
StartedAt: 2013-03-24 11:32:41 -0700 (Sun, 24 Mar 2013)
EndedAt: 2013-03-24 11:32:48 -0700 (Sun, 24 Mar 2013)
EllapsedTime: 7.8 seconds
RetCode: 0
Status:  OK 
PackageFile: CNVtools_1.53.0.tgz
PackageFileSize: 860.9 KiB

Command output

* installing *source* package 'CNVtools' ...
** libs
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c fitmodel.cpp -o fitmodel.o
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c glm_test.cpp -o glm_test.o
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c mla.cpp -o mla.o
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c routine.cpp -o routine.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c zeroin.c -o zeroin.o
llvm-g++-4.2 -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o CNVtools.so fitmodel.o glm_test.o mla.o routine.o zeroin.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.12-bioc/meat/CNVtools.buildbin-libdir/CNVtools/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'CNVtools-vignette.Rnw' 
** testing if installed package can be loaded
packaged installation of 'CNVtools' as 'CNVtools_1.53.0.tgz'
* DONE (CNVtools)