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Package 95/658HostnameOS / ArchBUILDCHECKBUILD BIN
CALIB 1.25.0
Hui Zhao
Snapshot Date: 2013-03-23 17:02:20 -0700 (Sat, 23 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/CALIB
Last Changed Rev: 70052 / Revision: 74756
Last Changed Date: 2012-10-01 15:43:56 -0700 (Mon, 01 Oct 2012)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
petty Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
pelham Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK [ OK ]

Summary

Package: CALIB
Version: 1.25.0
Command: rm -rf CALIB.buildbin-libdir && mkdir CALIB.buildbin-libdir && /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL --build --no-multiarch --library=CALIB.buildbin-libdir CALIB_1.25.0.tar.gz
StartedAt: 2013-03-24 11:28:21 -0700 (Sun, 24 Mar 2013)
EndedAt: 2013-03-24 11:28:38 -0700 (Sun, 24 Mar 2013)
EllapsedTime: 17.3 seconds
RetCode: 0
Status:  OK 
PackageFile: CALIB_1.25.0.tgz
PackageFileSize: 2.024 MiB

Command output

* installing *source* package 'CALIB' ...
** libs
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c Design.cpp -o Design.o
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c Estimation.cpp -o Estimation.o
Estimation.cpp: In function 'SEXPREC* estimation(SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*)':
Estimation.cpp:144: warning: deprecated conversion from string constant to 'char*'
Estimation.cpp:144: warning: deprecated conversion from string constant to 'char*'
Estimation.cpp:144: warning: deprecated conversion from string constant to 'char*'
Estimation.cpp:144: warning: deprecated conversion from string constant to 'char*'
Estimation.cpp:144: warning: deprecated conversion from string constant to 'char*'
Estimation.cpp:144: warning: deprecated conversion from string constant to 'char*'
Estimation.cpp:144: warning: deprecated conversion from string constant to 'char*'
Estimation.cpp:144: warning: deprecated conversion from string constant to 'char*'
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c NormalizedData.cpp -o NormalizedData.o
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c ParameterofOneArray.cpp -o ParameterofOneArray.o
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c RawDataofOneArray.cpp -o RawDataofOneArray.o
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c SpikeofOneArray.cpp -o SpikeofOneArray.o
llvm-g++-4.2 -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o CALIB.so Design.o Estimation.o NormalizedData.o ParameterofOneArray.o RawDataofOneArray.o SpikeofOneArray.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.12-bioc/meat/CALIB.buildbin-libdir/CALIB/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'quickstart.Rnw' 
** testing if installed package can be loaded
packaged installation of 'CALIB' as 'CALIB_1.25.0.tgz'
* DONE (CALIB)